| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
Click here to switch to the map view.
The map label for this gene is rstB
Identifier: 59713763
GI number: 59713763
Start: 663082
End: 663408
Strand: Reverse
Name: rstB
Synonym: VF_A0580
Alternate gene names: NA
Gene position: 663408-663082 (Counterclockwise)
Preceding gene: 59713764
Following gene: 172087808
Centisome position: 49.87
GC content: 31.5
Gene sequence:
>327_bases ATGAAAATCGTAGCTTTTGGTTATTCAAATTCTGTTGGTTTAGCAAAATCAAATAATGAACCTTACGATATTAAAAATCT ATTTGTTGGTAAACCTATTCGACAATGGAAAACAGATAAAGGGGTAGGTGAAGCTTCTGGGCATGAATCAATTGAAATCC CATTTCAATCGAATGATGAACTTTTAAATAAAATCAAAAATATTGCTTTCCCTGCTTTAGTGGAATTAAAAACAGAACCA CTTCCAGAGGACCCAACAAAAAATATTATTATCGGTTTAGATGTTATTTGTACGCTTTGGGATTCAGTTCCGCACAATAA AAAATAA
Upstream 100 bases:
>100_bases CAAATGGAAATCCCGACGGTGATAGCATACAGCTTAATGATAAATTTGTTTTACCCAATGTTTATAAAAAATTAATGATT GAAATATTGGAGAAATAAAT
Downstream 100 bases:
>100_bases TCTATTTCGTGTCTTATATTTGGAATGATGCTTTATATTTTGAAGTGGTTAAAAGTATCTTAGTTTTATTCTTCACTTCT TTTGGGATTGGCGCGGTTGC
Product: RstB2 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHESIEIPFQSNDELLNKIKNIAFPALVELKTEP LPEDPTKNIIIGLDVICTLWDSVPHNKK
Sequences:
>Translated_108_residues MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHESIEIPFQSNDELLNKIKNIAFPALVELKTEP LPEDPTKNIIIGLDVICTLWDSVPHNKK >Mature_108_residues MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHESIEIPFQSNDELLNKIKNIAFPALVELKTEP LPEDPTKNIIIGLDVICTLWDSVPHNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12018; Mature: 12018
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHESIEIPFQSNDE CEEEEECCCCCCCEEECCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCEEEECCCCCHH LLNKIKNIAFPALVELKTEPLPEDPTKNIIIGLDVICTLWDSVPHNKK HHHHHHHCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIVAFGYSNSVGLAKSNNEPYDIKNLFVGKPIRQWKTDKGVGEASGHESIEIPFQSNDE CEEEEECCCCCCCEEECCCCCCCCCCEECCCCHHHHCCCCCCCCCCCCCEEEECCCCCHH LLNKIKNIAFPALVELKTEPLPEDPTKNIIIGLDVICTLWDSVPHNKK HHHHHHHCCCCCEEEEECCCCCCCCCCCEEEHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA