Click here to switch to the map view.

The map label for this gene is 59713701

Identifier: 59713701

GI number: 59713701

Start: 594094

End: 594429

Strand: Reverse

Name: 59713701

Synonym: VF_A0518

Alternate gene names: NA

Gene position: 594429-594094 (Counterclockwise)

Preceding gene: 59713702

Following gene: 59713700

Centisome position: 44.68

GC content: 37.5

Gene sequence:

>336_bases
ATGAGCACTAGTAATGTACTACACCACACAAGTGATGAAGAACTCATCGCTTTAATTCAACGAAAAGAATCGTTCACTTT
AACTAAGGTCACAAATTTCTCTCAAACAGTGAAAAAAATTGAGCGACTTATTGAAGCTAACAATTTGTCTTGTCGAGTTT
ATACCGCTGGTCGCTCCACTACGATGGCAGCAAGTTTAGCGTCTGGCCCTGCATCAATTTTTGGACTAGCTTCTGCTACT
GTAATCGCAATGCATAATATAGCAACGTATTCACCTGACTATGAAATTGCTAAGTATCCATTAGCTGACAAACTTGTCAT
CAACTATAAAAAATAA

Upstream 100 bases:

>100_bases
TAACCTAGTTCACACATTTAGATGACCAAAATCGAGTGAGACACTATTTGTCTCACTCGTCATTATCTTTACTCCATTAA
TAATCCTTTAGGGAAGAACC

Downstream 100 bases:

>100_bases
TCCGACCACTCTGTCTATCTATAACTGAGGTTTCTACAACCTCAGTGAATTCAAACCAGTCAATATTTATATAAATAACA
ACGTATTAACCTCAAACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MSTSNVLHHTSDEELIALIQRKESFTLTKVTNFSQTVKKIERLIEANNLSCRVYTAGRSTTMAASLASGPASIFGLASAT
VIAMHNIATYSPDYEIAKYPLADKLVINYKK

Sequences:

>Translated_111_residues
MSTSNVLHHTSDEELIALIQRKESFTLTKVTNFSQTVKKIERLIEANNLSCRVYTAGRSTTMAASLASGPASIFGLASAT
VIAMHNIATYSPDYEIAKYPLADKLVINYKK
>Mature_110_residues
STSNVLHHTSDEELIALIQRKESFTLTKVTNFSQTVKKIERLIEANNLSCRVYTAGRSTTMAASLASGPASIFGLASATV
IAMHNIATYSPDYEIAKYPLADKLVINYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12183; Mature: 12052

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSNVLHHTSDEELIALIQRKESFTLTKVTNFSQTVKKIERLIEANNLSCRVYTAGRST
CCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCC
TMAASLASGPASIFGLASATVIAMHNIATYSPDYEIAKYPLADKLVINYKK
CCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECC
>Mature Secondary Structure 
STSNVLHHTSDEELIALIQRKESFTLTKVTNFSQTVKKIERLIEANNLSCRVYTAGRST
CCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCCCC
TMAASLASGPASIFGLASATVIAMHNIATYSPDYEIAKYPLADKLVINYKK
CCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA