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The map label for this gene is hdeD [C]

Identifier: 59713554

GI number: 59713554

Start: 417813

End: 418373

Strand: Reverse

Name: hdeD [C]

Synonym: VF_A0371

Alternate gene names: 59713554

Gene position: 418373-417813 (Counterclockwise)

Preceding gene: 59713561

Following gene: 59713544

Centisome position: 31.45

GC content: 36.72

Gene sequence:

>561_bases
ATGGAAAATCAAACTCCAAGTCAGGCTTTAATTTCCAAAGGTTGGAAATATTTTATTATTGTTGGCGTCATTGTCGCGCT
TGCTGGGTTAGGAGCAACTAGCCTACCTGTTATGGCTGGTGTGACGATTTCAACAATCATCGGCACCCTATTATTAATTA
CAGGGTTAGTTCAGGTTTACCATACTTTTCGTATTCACTCTTGGAAAGAAAAATTATGGTATGTATTAAGTGCTTTATTT
TATATTGTTGGTGCTCTATTTATTCTCTTTAAGCCACTAGAAGGGCTTATGACCATCACTACCATCATGATTGTGATTAT
GATCTTTAATGGCCTAACACGCATGATTTTTGGGTTTACCAATAGAAGCCTTCCTGGTTGTGGAATGGTTATTTTGAGTG
GATTACTTTCTGTCGTTATCGGTGGGTACTTCTTTAGCCTATTCGATAATCCTGAATTTTCTCTATCCTTATTAGGTACT
TTTGTTGGTGTATCGCTAATCTTTGAAGGAATGAGTTTTCTATTCATTGGTTTACGACTCAGAAATGCATCAAAGGCATA
A

Upstream 100 bases:

>100_bases
TCTAATTACAAAATTTATAACACAGATATAATCTATTTTAACAAGCAAGAATGAACAAGTACTTATGTAGATTGGTATTA
TATTTAACTCAGAGGTTAAA

Downstream 100 bases:

>100_bases
TAAATTGATTCTAGATCTACCAGTAATGAACGACTGAGTTCCGAATTAAAAAAGATAGCCCGCAGTATAAGGAAATAATG
CGGGCTTTTTATTGTTAATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MENQTPSQALISKGWKYFIIVGVIVALAGLGATSLPVMAGVTISTIIGTLLLITGLVQVYHTFRIHSWKEKLWYVLSALF
YIVGALFILFKPLEGLMTITTIMIVIMIFNGLTRMIFGFTNRSLPGCGMVILSGLLSVVIGGYFFSLFDNPEFSLSLLGT
FVGVSLIFEGMSFLFIGLRLRNASKA

Sequences:

>Translated_186_residues
MENQTPSQALISKGWKYFIIVGVIVALAGLGATSLPVMAGVTISTIIGTLLLITGLVQVYHTFRIHSWKEKLWYVLSALF
YIVGALFILFKPLEGLMTITTIMIVIMIFNGLTRMIFGFTNRSLPGCGMVILSGLLSVVIGGYFFSLFDNPEFSLSLLGT
FVGVSLIFEGMSFLFIGLRLRNASKA
>Mature_186_residues
MENQTPSQALISKGWKYFIIVGVIVALAGLGATSLPVMAGVTISTIIGTLLLITGLVQVYHTFRIHSWKEKLWYVLSALF
YIVGALFILFKPLEGLMTITTIMIVIMIFNGLTRMIFGFTNRSLPGCGMVILSGLLSVVIGGYFFSLFDNPEFSLSLLGT
FVGVSLIFEGMSFLFIGLRLRNASKA

Specific function: Unknown

COG id: COG3247

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasmic protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20359; Mature: 20359

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQTPSQALISKGWKYFIIVGVIVALAGLGATSLPVMAGVTISTIIGTLLLITGLVQVY
CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTFRIHSWKEKLWYVLSALFYIVGALFILFKPLEGLMTITTIMIVIMIFNGLTRMIFGFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSLPGCGMVILSGLLSVVIGGYFFSLFDNPEFSLSLLGTFVGVSLIFEGMSFLFIGLRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNASKA
HCCCCC
>Mature Secondary Structure
MENQTPSQALISKGWKYFIIVGVIVALAGLGATSLPVMAGVTISTIIGTLLLITGLVQVY
CCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
HTFRIHSWKEKLWYVLSALFYIVGALFILFKPLEGLMTITTIMIVIMIFNGLTRMIFGFT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NRSLPGCGMVILSGLLSVVIGGYFFSLFDNPEFSLSLLGTFVGVSLIFEGMSFLFIGLRL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RNASKA
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA