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The map label for this gene is yidK [H]

Identifier: 59713534

GI number: 59713534

Start: 392512

End: 394143

Strand: Reverse

Name: yidK [H]

Synonym: VF_A0351

Alternate gene names: 59713534

Gene position: 394143-392512 (Counterclockwise)

Preceding gene: 59713540

Following gene: 59713533

Centisome position: 29.63

GC content: 39.71

Gene sequence:

>1632_bases
ATGTCTCATGTAGAAAATGGATTAGGTATTGTCGATATCATCGTTTTTGCTCTCTATGTAGCAATCATTATCGGCGTTGG
CCTCTGGGTATCCAGAGATAAAAAAGGCTCTCAAAAAAGTACAGAGGATTATTTCCTCGCAGGGAAATCGCTACCTTGGT
GGGCGGTTGGTTCATCCTTAATCGCCGCTAATATTTCAGCGGAACAATTTATTGGAATGTCAGGATCTGGCTTTTCTATC
GGTTTAGCGATTGCTTCCTATGAATGGATGGCAGCACTAACCTTAATCATTGTTGGTAAGTATTTCTTGCCTATTTTTAT
CGATAAAGGCATCTACACGATTCCAGAATTTGTAGAAAAACGCTTTAACAAAAACTTAAAAACCATTTTGGCGGTATTTT
GGATTTGCTTGTATGTCTTTGTAAACCTAACCTCAGTTCTATACTTAGGCGGCCTTGCACTGCAAACGATTCTTGGTATT
CCACTCATGTACTCAATTATTGGCTTAGCATTATTTGCATTGGCCTACTCTATTTACGGTGGGTTATCAGCGGTTGTTTG
GACTGACGTGATTCAAGTATTCTTCTTGATCCTTGGTGGCCTATTAACCACTTACATGGCTGTTGATTTCATCGGCGGTA
CTGACGGTTGGTTTAGTGGTTTATCAAAAATGGCGACAGCTGCACCAGGCCACTTTGAAATGATTTTAGATCAAAGTAAT
CCTCAATATATGAACTTACCAGGTATCGCAGTTCTTATTGGTGGTCTATGGGTTGCAAACCTATATTACTGGGGCTTTAA
CCAATACATCATTCAAAGAACATTAGCGGCTAAATCTATTGCTGAAGCTCAAAAAGGGATTATTTTCGCTGCTTTCTTAA
AATTACTCGTGCCATTCCTAGTTGTCGTTCCAGGGATCGCCGCTTACGTAATTACCACTTCTCCAGAGCTGATGTCACAA
CTTGGAAGTATTGCAACGTCCAACGTTCCTACGCTTGCTCATGCAGATAAAGCTTATCCATGGCTAACACAATTCTTACC
AGTTGGATTTAAAGGTATTGTATTTGCCGCATTAGCCGCAGCAATTGTGTCGTCATTAGCTTCAATGCTGAACTCAACGG
CTACCATATTCACAATGGATATCTACAAAGAATTTGTTGGTAAAAAAGCAGGCGACCACAAGCTTGTAAATGTAGGTCGT
ATTTCAGCTATCGTGGCTTTAGTTGTCGCTTGTTTAATCGCTCCAATGCTAAGTAACCTTGGTCAAGCATTCCAATATAT
TCAAGAATACACAGGTTTAGTAAGCCCAGGTATCTTGGCGGTCTTCTTACTAGGTCTATTTTGGAAGAAAACCAACAGTA
AAGGTGCAGTTATTGGTGTAATAGTATCAATCCCATTTGCACTGTTCTTAAAATTTATGCCATTAAACATGCCGTTTATG
GATCAAATGCTATACACACTTCTGTTTACTATGGCAGTGATTGCATTCACGAGTCTAAGTTACTCAGATCATGATGATGA
TCCTAAAGCTATCGCATTAGACTCTTCCATGTTTGCGACAGAACGTAATTTTAATATTGCCGCTTACGTTGTTGTGATTA
TTCTTGCAGTGCTGTACTCAGTATTCTGGTAA

Upstream 100 bases:

>100_bases
ATACCATTTGTAACATTTTGTGACAGCTATCACCACCACGACAATTGTAAACGTTTACAATCCAACCTCAAATCAAAACA
ATAAGTGGTAGGTTAATACA

Downstream 100 bases:

>100_bases
TCTTCTCTAGCCTCATCCAATGATGGGGCTATTCATATTAATTATCAATTGGTTGCAATTAATATGAATAGCCTGCAATG
TTTGTAGAGCGTAACGTTAT

Product: transporter

Products: NA

Alternate protein names: Na(+)/glucose symporter [H]

Number of amino acids: Translated: 543; Mature: 542

Protein sequence:

>543_residues
MSHVENGLGIVDIIVFALYVAIIIGVGLWVSRDKKGSQKSTEDYFLAGKSLPWWAVGSSLIAANISAEQFIGMSGSGFSI
GLAIASYEWMAALTLIIVGKYFLPIFIDKGIYTIPEFVEKRFNKNLKTILAVFWICLYVFVNLTSVLYLGGLALQTILGI
PLMYSIIGLALFALAYSIYGGLSAVVWTDVIQVFFLILGGLLTTYMAVDFIGGTDGWFSGLSKMATAAPGHFEMILDQSN
PQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSIAEAQKGIIFAAFLKLLVPFLVVVPGIAAYVITTSPELMSQ
LGSIATSNVPTLAHADKAYPWLTQFLPVGFKGIVFAALAAAIVSSLASMLNSTATIFTMDIYKEFVGKKAGDHKLVNVGR
ISAIVALVVACLIAPMLSNLGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTNSKGAVIGVIVSIPFALFLKFMPLNMPFM
DQMLYTLLFTMAVIAFTSLSYSDHDDDPKAIALDSSMFATERNFNIAAYVVVIILAVLYSVFW

Sequences:

>Translated_543_residues
MSHVENGLGIVDIIVFALYVAIIIGVGLWVSRDKKGSQKSTEDYFLAGKSLPWWAVGSSLIAANISAEQFIGMSGSGFSI
GLAIASYEWMAALTLIIVGKYFLPIFIDKGIYTIPEFVEKRFNKNLKTILAVFWICLYVFVNLTSVLYLGGLALQTILGI
PLMYSIIGLALFALAYSIYGGLSAVVWTDVIQVFFLILGGLLTTYMAVDFIGGTDGWFSGLSKMATAAPGHFEMILDQSN
PQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSIAEAQKGIIFAAFLKLLVPFLVVVPGIAAYVITTSPELMSQ
LGSIATSNVPTLAHADKAYPWLTQFLPVGFKGIVFAALAAAIVSSLASMLNSTATIFTMDIYKEFVGKKAGDHKLVNVGR
ISAIVALVVACLIAPMLSNLGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTNSKGAVIGVIVSIPFALFLKFMPLNMPFM
DQMLYTLLFTMAVIAFTSLSYSDHDDDPKAIALDSSMFATERNFNIAAYVVVIILAVLYSVFW
>Mature_542_residues
SHVENGLGIVDIIVFALYVAIIIGVGLWVSRDKKGSQKSTEDYFLAGKSLPWWAVGSSLIAANISAEQFIGMSGSGFSIG
LAIASYEWMAALTLIIVGKYFLPIFIDKGIYTIPEFVEKRFNKNLKTILAVFWICLYVFVNLTSVLYLGGLALQTILGIP
LMYSIIGLALFALAYSIYGGLSAVVWTDVIQVFFLILGGLLTTYMAVDFIGGTDGWFSGLSKMATAAPGHFEMILDQSNP
QYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSIAEAQKGIIFAAFLKLLVPFLVVVPGIAAYVITTSPELMSQL
GSIATSNVPTLAHADKAYPWLTQFLPVGFKGIVFAALAAAIVSSLASMLNSTATIFTMDIYKEFVGKKAGDHKLVNVGRI
SAIVALVVACLIAPMLSNLGQAFQYIQEYTGLVSPGILAVFLLGLFWKKTNSKGAVIGVIVSIPFALFLKFMPLNMPFMD
QMLYTLLFTMAVIAFTSLSYSDHDDDPKAIALDSSMFATERNFNIAAYVVVIILAVLYSVFW

Specific function: Actively transports glucose into cells by Na(+) cotransport [H]

COG id: COG4146

COG function: function code R; Predicted symporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]

Homologues:

Organism=Homo sapiens, GI17941285, Length=472, Percent_Identity=34.3220338983051, Blast_Score=262, Evalue=7e-70,
Organism=Homo sapiens, GI4507033, Length=477, Percent_Identity=33.3333333333333, Blast_Score=250, Evalue=2e-66,
Organism=Homo sapiens, GI110835708, Length=487, Percent_Identity=34.4969199178645, Blast_Score=246, Evalue=4e-65,
Organism=Homo sapiens, GI4507031, Length=470, Percent_Identity=31.7021276595745, Blast_Score=238, Evalue=1e-62,
Organism=Homo sapiens, GI14140236, Length=497, Percent_Identity=29.3762575452716, Blast_Score=229, Evalue=4e-60,
Organism=Homo sapiens, GI109659836, Length=478, Percent_Identity=33.2635983263598, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI109659839, Length=486, Percent_Identity=32.5102880658436, Blast_Score=224, Evalue=2e-58,
Organism=Homo sapiens, GI206597483, Length=500, Percent_Identity=32.2, Blast_Score=222, Evalue=6e-58,
Organism=Homo sapiens, GI206597487, Length=524, Percent_Identity=30.1526717557252, Blast_Score=209, Evalue=4e-54,
Organism=Homo sapiens, GI4507035, Length=532, Percent_Identity=26.1278195488722, Blast_Score=123, Evalue=6e-28,
Organism=Homo sapiens, GI167466278, Length=467, Percent_Identity=24.4111349036403, Blast_Score=100, Evalue=4e-21,
Organism=Homo sapiens, GI157671931, Length=466, Percent_Identity=23.3905579399142, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI256985183, Length=444, Percent_Identity=24.0990990990991, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI11141885, Length=484, Percent_Identity=25, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1790113, Length=485, Percent_Identity=31.9587628865979, Blast_Score=212, Evalue=5e-56,
Organism=Escherichia coli, GI87082237, Length=463, Percent_Identity=25.4859611231102, Blast_Score=78, Evalue=2e-15,
Organism=Escherichia coli, GI1787251, Length=473, Percent_Identity=23.8900634249471, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790503, Length=457, Percent_Identity=21.2253829321663, Blast_Score=72, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI115533094, Length=501, Percent_Identity=26.1477045908184, Blast_Score=110, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI115533096, Length=364, Percent_Identity=27.1978021978022, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24651739, Length=469, Percent_Identity=23.8805970149254, Blast_Score=122, Evalue=9e-28,
Organism=Drosophila melanogaster, GI221459586, Length=498, Percent_Identity=25.1004016064257, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24651741, Length=456, Percent_Identity=22.3684210526316, Blast_Score=106, Evalue=4e-23,
Organism=Drosophila melanogaster, GI28573698, Length=446, Percent_Identity=25.3363228699552, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24645928, Length=537, Percent_Identity=24.2085661080074, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI281362918, Length=464, Percent_Identity=24.7844827586207, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI221459588, Length=492, Percent_Identity=24.7967479674797, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI221459584, Length=507, Percent_Identity=21.6962524654832, Blast_Score=87, Evalue=3e-17,
Organism=Drosophila melanogaster, GI19920916, Length=455, Percent_Identity=24.3956043956044, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI161076631, Length=443, Percent_Identity=22.7990970654628, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24640370, Length=485, Percent_Identity=23.0927835051546, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24648033, Length=419, Percent_Identity=24.1050119331742, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356865, Length=419, Percent_Identity=24.1050119331742, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281362054, Length=477, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281362052, Length=477, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI281362050, Length=477, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24648056, Length=477, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI21356827, Length=477, Percent_Identity=22.6415094339623, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24650192, Length=490, Percent_Identity=22.6530612244898, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24641117, Length=484, Percent_Identity=22.5206611570248, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI28574994, Length=466, Percent_Identity=21.244635193133, Blast_Score=70, Evalue=3e-12,
Organism=Drosophila melanogaster, GI221379702, Length=377, Percent_Identity=23.6074270557029, Blast_Score=66, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001734
- InterPro:   IPR018212
- InterPro:   IPR019900 [H]

Pfam domain/function: PF00474 SSF [H]

EC number: NA

Molecular weight: Translated: 59033; Mature: 58901

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00456 NA_SOLUT_SYMP_1 ; PS50283 NA_SOLUT_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHVENGLGIVDIIVFALYVAIIIGVGLWVSRDKKGSQKSTEDYFLAGKSLPWWAVGSSL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHEEECCCCCHHHHCCHH
IAANISAEQFIGMSGSGFSIGLAIASYEWMAALTLIIVGKYFLPIFIDKGIYTIPEFVEK
HHCCCCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
RFNKNLKTILAVFWICLYVFVNLTSVLYLGGLALQTILGIPLMYSIIGLALFALAYSIYG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLSAVVWTDVIQVFFLILGGLLTTYMAVDFIGGTDGWFSGLSKMATAAPGHFEMILDQSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
PQYMNLPGIAVLIGGLWVANLYYWGFNQYIIQRTLAAKSIAEAQKGIIFAAFLKLLVPFL
CCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVVPGIAAYVITTSPELMSQLGSIATSNVPTLAHADKAYPWLTQFLPVGFKGIVFAALAA
HHHCCHHHEEEECCHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHCCCHHHHHHHHHHH
AIVSSLASMLNSTATIFTMDIYKEFVGKKAGDHKLVNVGRISAIVALVVACLIAPMLSNL
HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHH
GQAFQYIQEYTGLVSPGILAVFLLGLFWKKTNSKGAVIGVIVSIPFALFLKFMPLNMPFM
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCHH
DQMLYTLLFTMAVIAFTSLSYSDHDDDPKAIALDSSMFATERNFNIAAYVVVIILAVLYS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHCCCCCHHHHHHHHHHHHHHH
VFW
HCC
>Mature Secondary Structure 
SHVENGLGIVDIIVFALYVAIIIGVGLWVSRDKKGSQKSTEDYFLAGKSLPWWAVGSSL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHEEECCCCCHHHHCCHH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HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8652595; 10835424; 10757971 [H]