| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713509
Identifier: 59713509
GI number: 59713509
Start: 360529
End: 361227
Strand: Reverse
Name: 59713509
Synonym: VF_A0326
Alternate gene names: NA
Gene position: 361227-360529 (Counterclockwise)
Preceding gene: 59713511
Following gene: 59713507
Centisome position: 27.15
GC content: 36.19
Gene sequence:
>699_bases ATGGCAAATTTCAGCACACATTTAAATGTCGCCGCATTAACATCTGGTGCCGCCTCTGCAGCACTTCTTTCCGCTAACCA TATCGATCTTGATACGGCATTATGGCTTTGGTTTTTAGGTACCATTGGTGGCCTGCTGCCTGATATTGACTCAGACAATT CCACCTCTCTCGATATTATTTTTAATCTTTTTACTGTGTGTATTGTTTTACTCAGTATTCGCTACTTTACGAGTGATGCC ATTAATGAAAGGCAATTTATGCTTTTAATTGGTTTACCTGTTGTAATACACCTAATTATAAAATATGGGATCCGAAACGT ATTCGAGTGGCAAACGATTCATAGAGGCATATGTCATTCATTGTTATTTTTGCTCTTTTGCGGCTTACTAACCACAAACA CAACCGCTTTTATTATCAATGACAAATTTAAAAATGCGGATCTATTTGCTTGGTTATCCGGCATTTTTGTATTCTGTGGT GGTGTCATTCATCTTCTATTAGACGAAATATACAGTGTTGATTTGGCCAATGTTCGTATTAAACGCTCATTTGGTTCAGC ATTAAAACTGACTGATTTTTCAAACTTATCGCTATCTGCAATATTCGTAATTGCTACGGTGATTTTAGCTTTTTTAGCAC CTCCAATTGATTCAAGTATTGAAGCGTTAAGTAATTGGGATACCTTTAAATTATGGTAA
Upstream 100 bases:
>100_bases TAGATACCTAACGCAATGAACAGTAATGCAAATATTTTAAACATAATTTCTTATCTCAATTAATCAGCCTTCATATTACA AAAGAATTCTTAGAAAACCT
Downstream 100 bases:
>100_bases TAAAAAAGCACAAGATCTCATCAATCTTGTGCTTTTATGTATTAATTTACGTATCGATTAAAGTGTAAAACGCTCAACTA ATTCTGACAGTTCGTTGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MANFSTHLNVAALTSGAASAALLSANHIDLDTALWLWFLGTIGGLLPDIDSDNSTSLDIIFNLFTVCIVLLSIRYFTSDA INERQFMLLIGLPVVIHLIIKYGIRNVFEWQTIHRGICHSLLFLLFCGLLTTNTTAFIINDKFKNADLFAWLSGIFVFCG GVIHLLLDEIYSVDLANVRIKRSFGSALKLTDFSNLSLSAIFVIATVILAFLAPPIDSSIEALSNWDTFKLW
Sequences:
>Translated_232_residues MANFSTHLNVAALTSGAASAALLSANHIDLDTALWLWFLGTIGGLLPDIDSDNSTSLDIIFNLFTVCIVLLSIRYFTSDA INERQFMLLIGLPVVIHLIIKYGIRNVFEWQTIHRGICHSLLFLLFCGLLTTNTTAFIINDKFKNADLFAWLSGIFVFCG GVIHLLLDEIYSVDLANVRIKRSFGSALKLTDFSNLSLSAIFVIATVILAFLAPPIDSSIEALSNWDTFKLW >Mature_231_residues ANFSTHLNVAALTSGAASAALLSANHIDLDTALWLWFLGTIGGLLPDIDSDNSTSLDIIFNLFTVCIVLLSIRYFTSDAI NERQFMLLIGLPVVIHLIIKYGIRNVFEWQTIHRGICHSLLFLLFCGLLTTNTTAFIINDKFKNADLFAWLSGIFVFCGG VIHLLLDEIYSVDLANVRIKRSFGSALKLTDFSNLSLSAIFVIATVILAFLAPPIDSSIEALSNWDTFKLW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25677; Mature: 25546
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANFSTHLNVAALTSGAASAALLSANHIDLDTALWLWFLGTIGGLLPDIDSDNSTSLDII CCCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FNLFTVCIVLLSIRYFTSDAINERQFMLLIGLPVVIHLIIKYGIRNVFEWQTIHRGICHS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFLLFCGLLTTNTTAFIINDKFKNADLFAWLSGIFVFCGGVIHLLLDEIYSVDLANVRI HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEE KRSFGSALKLTDFSNLSLSAIFVIATVILAFLAPPIDSSIEALSNWDTFKLW ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECC >Mature Secondary Structure ANFSTHLNVAALTSGAASAALLSANHIDLDTALWLWFLGTIGGLLPDIDSDNSTSLDII CCCCCCCCHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH FNLFTVCIVLLSIRYFTSDAINERQFMLLIGLPVVIHLIIKYGIRNVFEWQTIHRGICHS HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLFLLFCGLLTTNTTAFIINDKFKNADLFAWLSGIFVFCGGVIHLLLDEIYSVDLANVRI HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHEEE KRSFGSALKLTDFSNLSLSAIFVIATVILAFLAPPIDSSIEALSNWDTFKLW ECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA