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The map label for this gene is glpB

Identifier: 59713432

GI number: 59713432

Start: 276503

End: 277870

Strand: Reverse

Name: glpB

Synonym: VF_A0249

Alternate gene names: 59713432

Gene position: 277870-276503 (Counterclockwise)

Preceding gene: 59713433

Following gene: 59713431

Centisome position: 20.89

GC content: 39.77

Gene sequence:

>1368_bases
ATGAATTTCGACACCATTATCATCGGCGGCGGCATGGCTGGTTTAAGCTGTGCTTTACGTTGCTTAGAAGCAGGACTAAA
GACCGCAGTGATTGCCTCAGGTCAAAGCGCTTTGCATTTCTCATCAGGTTCGATTGATGTTCTTGCCAAAACCCCCTCAG
GTAAGCATGTTATTAATCCAATGGATAGTCTCGAAACTTTTTCGAAAGAGTATCCGTCTCACCCCTACGCAGCATTGGGT
AAAGAGACCGTAGAACGGGCTATCAATTGGTATAAAACAACATTATCAGCTATTGGTGTTCCTTTAACATCCCAAAAAGA
TGGTTTGAATCACTACCGTCTAACACCATTAGGAACAATGAAATCAACGTGGTTATCACAACCTTTTGTACATCAATTCC
CTATGGATTTAGAAAAAAACAAAACACAAAAAATGGTGTTGATTACTATTGATGGCTTTCGTGATTTCCAACCTAAACTG
GCTCAAGACAATTTAAAACAGATCACTCAATTATCTGATCTTGAAATAGCAACAGCGAGCATATCCCTTTCTGCATTTAA
TGATATTCAACGTAATCATTGTGAATTACGCTCTATCGATATATCTCGCTTATTATCTAAACGAGCAAACCGTCAAGAGC
TAGCTTACGCTTTACAGCAACACGCCAATCCAGGTGATTTAGTTGTACTCCCATCTATTTTTGGAAATGGCACGGGATTA
AGCTACCTTCGTGAAATTGAGCAATTAACTAAGCTAACACTATGCGAAGTACCTACTATGCCGCCTTCACTACTAGGTAT
ACGCTTAGAAGAAAGCATGAAACACGCCTTTATTGAGCTAGGTGGCACCATGTTAAATGGTGATCATGTCGTTCAAGGGG
AGTTTTCTTATGTGGATAAGAGTGATCCTGAGCATTCTCACTATCGTTTAAATCGTCTTTTCACTAAAAACCATGGCGAT
TTTCCGCTACAAGCCAAACAGTTTGTCTTAGCCACTGGCAGCTTTTTTAGCCAAGGATTAAAGGCGAATGTTGATTCAAT
GATTGAACCCATCTTTGGATTGGATATAGCACAAAGTGATAAAAGAACGGATTGGTATAGCCACGATTTTTTTAGTACTC
AATCACACCCATTTTTAAGTATGGGTATTAAGACTACAGCTAATTTCCAAGCGATTAAATCAGGTCATGTGATCGATAAT
TTATACTGCGCTGGCGCAATTCTATCTGGCTATAATCCGATATTAGAAGGTAGCGGTAGTGGTGTTGCAATTAGTTCAGG
CTTTCACGCTGCAGAATCTATCATAGAGCAATTACAGTGCAGCGACTCTTTACAAAATAACAATACGAAAGCAGAGGTCG
CGTTATGA

Upstream 100 bases:

>100_bases
TACGAGAAGCAGAATTTAGCTATTGGATTTATGAAGGTCTGTTCGGAGCAAGTGACATTCCAAACCAACACTCTGAACAA
GAATCAAAAGAGGCAACATT

Downstream 100 bases:

>100_bases
GCAGCCCATTATTTAAGTCGTCTTTTCTAAAAGACAGTGTATTAAAAGACAATCTTATTTTTAGAGCACCCGCGAATACC
AGTTTTGATCAATGTTTAAA

Product: anaerobic glycerol-3-phosphate dehydrogenase subunit B

Products: NA

Alternate protein names: Anaerobic G-3-P dehydrogenase subunit B; Anaerobic G3Pdhase B

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNFDTIIIGGGMAGLSCALRCLEAGLKTAVIASGQSALHFSSGSIDVLAKTPSGKHVINPMDSLETFSKEYPSHPYAALG
KETVERAINWYKTTLSAIGVPLTSQKDGLNHYRLTPLGTMKSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQPKL
AQDNLKQITQLSDLEIATASISLSAFNDIQRNHCELRSIDISRLLSKRANRQELAYALQQHANPGDLVVLPSIFGNGTGL
SYLREIEQLTKLTLCEVPTMPPSLLGIRLEESMKHAFIELGGTMLNGDHVVQGEFSYVDKSDPEHSHYRLNRLFTKNHGD
FPLQAKQFVLATGSFFSQGLKANVDSMIEPIFGLDIAQSDKRTDWYSHDFFSTQSHPFLSMGIKTTANFQAIKSGHVIDN
LYCAGAILSGYNPILEGSGSGVAISSGFHAAESIIEQLQCSDSLQNNNTKAEVAL

Sequences:

>Translated_455_residues
MNFDTIIIGGGMAGLSCALRCLEAGLKTAVIASGQSALHFSSGSIDVLAKTPSGKHVINPMDSLETFSKEYPSHPYAALG
KETVERAINWYKTTLSAIGVPLTSQKDGLNHYRLTPLGTMKSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQPKL
AQDNLKQITQLSDLEIATASISLSAFNDIQRNHCELRSIDISRLLSKRANRQELAYALQQHANPGDLVVLPSIFGNGTGL
SYLREIEQLTKLTLCEVPTMPPSLLGIRLEESMKHAFIELGGTMLNGDHVVQGEFSYVDKSDPEHSHYRLNRLFTKNHGD
FPLQAKQFVLATGSFFSQGLKANVDSMIEPIFGLDIAQSDKRTDWYSHDFFSTQSHPFLSMGIKTTANFQAIKSGHVIDN
LYCAGAILSGYNPILEGSGSGVAISSGFHAAESIIEQLQCSDSLQNNNTKAEVAL
>Mature_455_residues
MNFDTIIIGGGMAGLSCALRCLEAGLKTAVIASGQSALHFSSGSIDVLAKTPSGKHVINPMDSLETFSKEYPSHPYAALG
KETVERAINWYKTTLSAIGVPLTSQKDGLNHYRLTPLGTMKSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQPKL
AQDNLKQITQLSDLEIATASISLSAFNDIQRNHCELRSIDISRLLSKRANRQELAYALQQHANPGDLVVLPSIFGNGTGL
SYLREIEQLTKLTLCEVPTMPPSLLGIRLEESMKHAFIELGGTMLNGDHVVQGEFSYVDKSDPEHSHYRLNRLFTKNHGD
FPLQAKQFVLATGSFFSQGLKANVDSMIEPIFGLDIAQSDKRTDWYSHDFFSTQSHPFLSMGIKTTANFQAIKSGHVIDN
LYCAGAILSGYNPILEGSGSGVAISSGFHAAESIIEQLQCSDSLQNNNTKAEVAL

Specific function: Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor

COG id: COG3075

COG function: function code E; Anaerobic glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Loosely Bound To The Cytoplasm Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic G-3-P dehydrogenase subunit B family

Homologues:

Organism=Escherichia coli, GI1788575, Length=437, Percent_Identity=36.1556064073227, Blast_Score=270, Evalue=1e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GLPB_VIBF1 (Q5E0X7)

Other databases:

- EMBL:   CP000021
- RefSeq:   YP_206207.1
- ProteinModelPortal:   Q5E0X7
- SMR:   Q5E0X7
- STRING:   Q5E0X7
- GeneID:   3281005
- GenomeReviews:   CP000021_GR
- KEGG:   vfi:VF_A0249
- NMPDR:   fig|312309.3.peg.2907
- eggNOG:   COG3075
- HOGENOM:   HBG297155
- OMA:   LEHKLAF
- PhylomeDB:   Q5E0X7
- ProtClustDB:   PRK05329
- BioCyc:   VFIS312309:VFA0249-MONOMER
- HAMAP:   MF_00753
- InterPro:   IPR003953
- InterPro:   IPR009158
- PIRSF:   PIRSF000141
- TIGRFAMs:   TIGR03378

Pfam domain/function: PF00890 FAD_binding_2

EC number: =1.1.5.3

Molecular weight: Translated: 49930; Mature: 49930

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFDTIIIGGGMAGLSCALRCLEAGLKTAVIASGQSALHFSSGSIDVLAKTPSGKHVINP
CCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEECCCCCEECCC
MDSLETFSKEYPSHPYAALGKETVERAINWYKTTLSAIGVPLTSQKDGLNHYRLTPLGTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCH
KSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQPKLAQDNLKQITQLSDLEIATAS
HHHHCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
ISLSAFNDIQRNHCELRSIDISRLLSKRANRQELAYALQQHANPGDLVVLPSIFGNGTGL
EEHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCH
SYLREIEQLTKLTLCEVPTMPPSLLGIRLEESMKHAFIELGGTMLNGDHVVQGEFSYVDK
HHHHHHHHHHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC
SDPEHSHYRLNRLFTKNHGDFPLQAKQFVLATGSFFSQGLKANVDSMIEPIFGLDIAQSD
CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCHHCCHHHHHHHHHCCCCCCCC
KRTDWYSHDFFSTQSHPFLSMGIKTTANFQAIKSGHVIDNLYCAGAILSGYNPILEGSGS
CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GVAISSGFHAAESIIEQLQCSDSLQNNNTKAEVAL
CEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MNFDTIIIGGGMAGLSCALRCLEAGLKTAVIASGQSALHFSSGSIDVLAKTPSGKHVINP
CCCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCEEEECCCCEEEEEECCCCCEECCC
MDSLETFSKEYPSHPYAALGKETVERAINWYKTTLSAIGVPLTSQKDGLNHYRLTPLGTM
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCH
KSTWLSQPFVHQFPMDLEKNKTQKMVLITIDGFRDFQPKLAQDNLKQITQLSDLEIATAS
HHHHCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
ISLSAFNDIQRNHCELRSIDISRLLSKRANRQELAYALQQHANPGDLVVLPSIFGNGTGL
EEHHHHHHHHHCCCHHHHCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCCCCCCCCH
SYLREIEQLTKLTLCEVPTMPPSLLGIRLEESMKHAFIELGGTMLNGDHVVQGEFSYVDK
HHHHHHHHHHHHHHHCCCCCCHHHHEEEHHHHHHHHHHHHCCEEECCCEEEECCCCCCCC
SDPEHSHYRLNRLFTKNHGDFPLQAKQFVLATGSFFSQGLKANVDSMIEPIFGLDIAQSD
CCCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCHHHHCCHHCCHHHHHHHHHCCCCCCCC
KRTDWYSHDFFSTQSHPFLSMGIKTTANFQAIKSGHVIDNLYCAGAILSGYNPILEGSGS
CCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
GVAISSGFHAAESIIEQLQCSDSLQNNNTKAEVAL
CEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA