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The map label for this gene is yraQ [C]

Identifier: 59713358

GI number: 59713358

Start: 198391

End: 199311

Strand: Reverse

Name: yraQ [C]

Synonym: VF_A0175

Alternate gene names: 59713358

Gene position: 199311-198391 (Counterclockwise)

Preceding gene: 59713361

Following gene: 59713357

Centisome position: 14.98

GC content: 38.55

Gene sequence:

>921_bases
ATGTTTACAATTACACAAGACATGGTGATGGACACCCTTAATATGTTTGCATTTTTAGCTGCAGAGCTAACCGTGCTTTT
CCTTTTAATTAGTTATCTAGTTGGTGTTTTGCAGGAGTATATTCCACCTTCAAAAATCCAAAGTATCTTGAGCGGAAAAA
ATGGCAGGGGCTATTTTGTTGCTGGTCTACTAGGTGCTATTACTCCATTCTGCTCATGCTCAACTATCCCTTTCTTAAAA
GGTTTACTTCGAGCAAAAGCTGGATTTGGTACCATGATGGTATTCTTATTTGCAAGCCCACTACTTAACCCTATTATTAT
TGGGCTATTCGCAGTTACTTTCGGTATTAAAGTGACCGTTTTCTACTTTGCTATTGCAATGGGTGTATCGGTTATTGCAG
GTTACTTACTAGAAAAACTTGGTTTTGAAAAATACGTAAAAGAAAGTGCTTACATTGCACCTGAGCCAAAATGTTGTGGT
TCAACTTGTGGTGGAGAGAAAAAAGCACCTCAAAGCAAATGGATGAAAATTTGGAACAGCACATGGAGTGATTTCAAAAA
AGTATTACCTTACTTAATCGGCGGTATTGCCCTTGGTTCGATGATCTACGGTTTTATGCCAACAGAATTTGTCGCTAAAG
TGGCAAGTGAAAATAACCCATTTGCTATTCCTGTTGCTGCAGTTATTGGTATTCCACTATACATTCGAGCTGAAGCGGTT
ATTCCTCTAAGTGCGGCATTAGCTGCAAAAGGTATGAGCCTAGGGGCAGTTATGGCATTAATTATTGGCAGTGCTGGTGC
AAGTTTAACTGAAGTGATTTTATTGAAATCTATCTTCAAAAACCAAATGATCATTGCCTTCCTAACTGTGATTTTAGGTA
TGGCAATGGGAGCCGGTTTCCTATACCAATTTATCTTTTAG

Upstream 100 bases:

>100_bases
TCCTCATTAAATTTATATTTCGATATTACTAGAAATATGTTGATCATGCTAATTGAAAAGCGTATATTTCGATTATTCCA
GAAATATAGAGATTTAGATT

Downstream 100 bases:

>100_bases
GATAGTCTGGCATTAAAAGATATTACATAATAAAAATCAGCCATATCAGGTCCTCTTGATATGGCTTTTTATCTTTGATT
ACAATTCAATAGAACGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: Permease Family Protein; Permease Superfamily; Permease-Like Protein; Integral Membrane Protein; Capsule Polysaccharide Transport

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MFTITQDMVMDTLNMFAFLAAELTVLFLLISYLVGVLQEYIPPSKIQSILSGKNGRGYFVAGLLGAITPFCSCSTIPFLK
GLLRAKAGFGTMMVFLFASPLLNPIIIGLFAVTFGIKVTVFYFAIAMGVSVIAGYLLEKLGFEKYVKESAYIAPEPKCCG
STCGGEKKAPQSKWMKIWNSTWSDFKKVLPYLIGGIALGSMIYGFMPTEFVAKVASENNPFAIPVAAVIGIPLYIRAEAV
IPLSAALAAKGMSLGAVMALIIGSAGASLTEVILLKSIFKNQMIIAFLTVILGMAMGAGFLYQFIF

Sequences:

>Translated_306_residues
MFTITQDMVMDTLNMFAFLAAELTVLFLLISYLVGVLQEYIPPSKIQSILSGKNGRGYFVAGLLGAITPFCSCSTIPFLK
GLLRAKAGFGTMMVFLFASPLLNPIIIGLFAVTFGIKVTVFYFAIAMGVSVIAGYLLEKLGFEKYVKESAYIAPEPKCCG
STCGGEKKAPQSKWMKIWNSTWSDFKKVLPYLIGGIALGSMIYGFMPTEFVAKVASENNPFAIPVAAVIGIPLYIRAEAV
IPLSAALAAKGMSLGAVMALIIGSAGASLTEVILLKSIFKNQMIIAFLTVILGMAMGAGFLYQFIF
>Mature_306_residues
MFTITQDMVMDTLNMFAFLAAELTVLFLLISYLVGVLQEYIPPSKIQSILSGKNGRGYFVAGLLGAITPFCSCSTIPFLK
GLLRAKAGFGTMMVFLFASPLLNPIIIGLFAVTFGIKVTVFYFAIAMGVSVIAGYLLEKLGFEKYVKESAYIAPEPKCCG
STCGGEKKAPQSKWMKIWNSTWSDFKKVLPYLIGGIALGSMIYGFMPTEFVAKVASENNPFAIPVAAVIGIPLYIRAEAV
IPLSAALAAKGMSLGAVMALIIGSAGASLTEVILLKSIFKNQMIIAFLTVILGMAMGAGFLYQFIF

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32860; Mature: 32860

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHC
>Mature Secondary Structure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HHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA