| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is 59713300
Identifier: 59713300
GI number: 59713300
Start: 132236
End: 133135
Strand: Reverse
Name: 59713300
Synonym: VF_A0117
Alternate gene names: NA
Gene position: 133135-132236 (Counterclockwise)
Preceding gene: 59713301
Following gene: 59713296
Centisome position: 10.01
GC content: 38.33
Gene sequence:
>900_bases ATGATGATAACACTGGTATTATCGTCATTTTTATCAAGAGATAACATCATGCGCGGTATGATCTATTTAATTATTGCTAC CATTCTGGCTGCCATTGGCTGGGGAGCATCAAAAATGGTCGTGATGACCATACCCGGTGATATTTTTATTGGAACTCGAT TTCTACTGGCTAGTTTTGTGCTGGCACCCTTTTGTTTTAAACAATTTCGCACATTAACTGGCAAACAAATTTTAGCCTTG AGTGGGGTTGGGTTGGTTTTATCTTTTGCTCTGCAAGTTTGGGTGTATGCCGTATCCATCACCACATCACTTGCTGAAGG CGCATTCATCATGAGTTTAGCGATGATCATTGCACCTATCATTTCATGGATATTATTTCGCAATAAACCCAATAAAGCCT TTTGGATTGCTCTACCAATATCAATACTTGGAATGATTTTGCTGACGTTAGGAAATGGTTGGAAATTAGAAGCCAGTCAA CTTGGCTTTATGCTATCTGCATTATTACTTTCCATGCATTTTGTGCTTAATAAACGCATCATTGGCGCAATCACACCACT TTTATCCATTTGTGTTCAATTATTTGTTGTAGGCCTTAGTGGGTGCTTGTATGCCTCGCTTAATTCCCATCCTTCTTTTG AAATCACTCAACATGCGGTCTTTTGGTTTTTAATTTCTACTATTGTAGCAACCGCAATTCGATACCTTGCACAAACTCTT GGACAATTCTCAGTTAACATTGAAACCGCTTCACTCATCATGATATTGGAGCCGGTTTGGACGCTTGTATTGAGTATTAG CGTACTTCATGAAGTTGTCGCACCTCAAAAACTCATTGGAGGTGCGGTCATATTTTTATCTTTATTTGTTTATATTAAAC TATCAAGAAGGCTGAAATAA
Upstream 100 bases:
>100_bases GCTTGTAGATTACCCTGAATACCAAGAAGCGCATTAAATTTAAAACAAATGAATCAACTACACATAACCCTGCTTTTTTG AGTGGGGTTATTTTTTATAA
Downstream 100 bases:
>100_bases TTGTTATTTCAATTGGTTGTGTATTTTCTGATACACAGCCTCCGCCAATTGGTGACTGGCAAGGTTACGATCCGCTGTTG CGGTTGATAACTTGCCTTTT
Product: drug/metabolite exporter family protein
Products: NA
Alternate protein names: RhaT Protein; DMT Superfamily Drug/Metabolite Transporter; DMT Family Permease; Permease DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Drug/Metabolite Exporter Family; Integral Membrane Protein; Drug Metabolite Transporter Permease; Transporter EamA Family; Integral Membrane Protein Transmembrane Transporter; Integral Membrane; Permease Of Drug/Metabolite Transporter
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MMITLVLSSFLSRDNIMRGMIYLIIATILAAIGWGASKMVVMTIPGDIFIGTRFLLASFVLAPFCFKQFRTLTGKQILAL SGVGLVLSFALQVWVYAVSITTSLAEGAFIMSLAMIIAPIISWILFRNKPNKAFWIALPISILGMILLTLGNGWKLEASQ LGFMLSALLLSMHFVLNKRIIGAITPLLSICVQLFVVGLSGCLYASLNSHPSFEITQHAVFWFLISTIVATAIRYLAQTL GQFSVNIETASLIMILEPVWTLVLSISVLHEVVAPQKLIGGAVIFLSLFVYIKLSRRLK
Sequences:
>Translated_299_residues MMITLVLSSFLSRDNIMRGMIYLIIATILAAIGWGASKMVVMTIPGDIFIGTRFLLASFVLAPFCFKQFRTLTGKQILAL SGVGLVLSFALQVWVYAVSITTSLAEGAFIMSLAMIIAPIISWILFRNKPNKAFWIALPISILGMILLTLGNGWKLEASQ LGFMLSALLLSMHFVLNKRIIGAITPLLSICVQLFVVGLSGCLYASLNSHPSFEITQHAVFWFLISTIVATAIRYLAQTL GQFSVNIETASLIMILEPVWTLVLSISVLHEVVAPQKLIGGAVIFLSLFVYIKLSRRLK >Mature_299_residues MMITLVLSSFLSRDNIMRGMIYLIIATILAAIGWGASKMVVMTIPGDIFIGTRFLLASFVLAPFCFKQFRTLTGKQILAL SGVGLVLSFALQVWVYAVSITTSLAEGAFIMSLAMIIAPIISWILFRNKPNKAFWIALPISILGMILLTLGNGWKLEASQ LGFMLSALLLSMHFVLNKRIIGAITPLLSICVQLFVVGLSGCLYASLNSHPSFEITQHAVFWFLISTIVATAIRYLAQTL GQFSVNIETASLIMILEPVWTLVLSISVLHEVVAPQKLIGGAVIFLSLFVYIKLSRRLK
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32831; Mature: 32831
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMITLVLSSFLSRDNIMRGMIYLIIATILAAIGWGASKMVVMTIPGDIFIGTRFLLASFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH LAPFCFKQFRTLTGKQILALSGVGLVLSFALQVWVYAVSITTSLAEGAFIMSLAMIIAPI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISWILFRNKPNKAFWIALPISILGMILLTLGNGWKLEASQLGFMLSALLLSMHFVLNKRI HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH IGAITPLLSICVQLFVVGLSGCLYASLNSHPSFEITQHAVFWFLISTIVATAIRYLAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GQFSVNIETASLIMILEPVWTLVLSISVLHEVVAPQKLIGGAVIFLSLFVYIKLSRRLK HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MMITLVLSSFLSRDNIMRGMIYLIIATILAAIGWGASKMVVMTIPGDIFIGTRFLLASFV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHH LAPFCFKQFRTLTGKQILALSGVGLVLSFALQVWVYAVSITTSLAEGAFIMSLAMIIAPI HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISWILFRNKPNKAFWIALPISILGMILLTLGNGWKLEASQLGFMLSALLLSMHFVLNKRI HHHHHHCCCCCCEEEEEEHHHHHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHHH IGAITPLLSICVQLFVVGLSGCLYASLNSHPSFEITQHAVFWFLISTIVATAIRYLAQTL HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GQFSVNIETASLIMILEPVWTLVLSISVLHEVVAPQKLIGGAVIFLSLFVYIKLSRRLK HHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA