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The map label for this gene is ynjF [H]

Identifier: 59713277

GI number: 59713277

Start: 105602

End: 106210

Strand: Reverse

Name: ynjF [H]

Synonym: VF_A0094

Alternate gene names: 59713277

Gene position: 106210-105602 (Counterclockwise)

Preceding gene: 59713278

Following gene: 59713275

Centisome position: 7.98

GC content: 39.9

Gene sequence:

>609_bases
ATGCTTGATAGTTTCAGTATTAAAGTGATTCGTTGGCCTTTAGCGCAAAGTGCCAAGCTCATTAATAAACTGGGAATTAC
AGCCAACCAAACGACGCTATTTGGTTTTGTTTTAGGCTGCTTAGCCTTCCCTGCTCTTATTGCAGAGCAATATTTGTTGG
CTCTAGTATTTATTGTCTTGAATCGCATTTGTGATGGATTAGATGGGGCATTAGCTCGAATACAAGGCATAACTGATGCG
GGCGGCTTTCTTGATATCAGTTTGGATTTTCTGTTTTATTCACTGATCCCTTTTGGATTTGTTCTCGCCAACCCTGATCA
AAATGCCATTGCGGGTGCGTTTTTAATTTTCTCATTTGTTGGGACAGGAAGCAGCTTTTTGGCTTTTGCTATTATGGCAA
GTAAACAAGGAATTGATAATCCAGTTTATAAACACAAATCCCTTTATTACATGAGTGGCTTAACCGAAGGAACAGAAACC
ATTGCGTGTTTTATCGCATTTTGTCTGTTTCCAACCCATTTTACCATTATCGCCTATGTGTTTGGTGCCGCTTGCTGGTT
TACCACCTTTACTCGCATTTACTCTGGGTTCCATACTTTAAAACCGTAA

Upstream 100 bases:

>100_bases
CAGCTAAAAGAAGCCAATATTCCGGCTTTAATGGTGACACACGATAAAGAAGATGTACCACAAGGAAGTCGAGTACTTAC
TTGGCCTTGGGAGGTAACTC

Downstream 100 bases:

>100_bases
GTTTAATCAACTCCACGCATAAAAAAACGGATGGTTTATGCCATCCGTTTTTAATTTTAAACAATCGATTATGGCAACTT
AAATAGCCCAACCACCAACA

Product: phosphatidyl transferase, inner membrane protein

Products: CMP; 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLDSFSIKVIRWPLAQSAKLINKLGITANQTTLFGFVLGCLAFPALIAEQYLLALVFIVLNRICDGLDGALARIQGITDA
GGFLDISLDFLFYSLIPFGFVLANPDQNAIAGAFLIFSFVGTGSSFLAFAIMASKQGIDNPVYKHKSLYYMSGLTEGTET
IACFIAFCLFPTHFTIIAYVFGAACWFTTFTRIYSGFHTLKP

Sequences:

>Translated_202_residues
MLDSFSIKVIRWPLAQSAKLINKLGITANQTTLFGFVLGCLAFPALIAEQYLLALVFIVLNRICDGLDGALARIQGITDA
GGFLDISLDFLFYSLIPFGFVLANPDQNAIAGAFLIFSFVGTGSSFLAFAIMASKQGIDNPVYKHKSLYYMSGLTEGTET
IACFIAFCLFPTHFTIIAYVFGAACWFTTFTRIYSGFHTLKP
>Mature_202_residues
MLDSFSIKVIRWPLAQSAKLINKLGITANQTTLFGFVLGCLAFPALIAEQYLLALVFIVLNRICDGLDGALARIQGITDA
GGFLDISLDFLFYSLIPFGFVLANPDQNAIAGAFLIFSFVGTGSSFLAFAIMASKQGIDNPVYKHKSLYYMSGLTEGTET
IACFIAFCLFPTHFTIIAYVFGAACWFTTFTRIYSGFHTLKP

Specific function: Unknown

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI87081968, Length=201, Percent_Identity=60.6965174129353, Blast_Score=226, Evalue=7e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: 2.7.8.5

Molecular weight: Translated: 22081; Mature: 22081

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDSFSIKVIRWPLAQSAKLINKLGITANQTTLFGFVLGCLAFPALIAEQYLLALVFIVL
CCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDGLDGALARIQGITDAGGFLDISLDFLFYSLIPFGFVLANPDQNAIAGAFLIFSFV
HHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
GTGSSFLAFAIMASKQGIDNPVYKHKSLYYMSGLTEGTETIACFIAFCLFPTHFTIIAYV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGAACWFTTFTRIYSGFHTLKP
HHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLDSFSIKVIRWPLAQSAKLINKLGITANQTTLFGFVLGCLAFPALIAEQYLLALVFIVL
CCCCCEEEEEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NRICDGLDGALARIQGITDAGGFLDISLDFLFYSLIPFGFVLANPDQNAIAGAFLIFSFV
HHHHCCHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH
GTGSSFLAFAIMASKQGIDNPVYKHKSLYYMSGLTEGTETIACFIAFCLFPTHFTIIAYV
CCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FGAACWFTTFTRIYSGFHTLKP
HHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: CDPdiacylglycerol; sn-glycerol 3-phosphate

Specific reaction: CDP-diacylglycerol + sn-glycerol 3-phosphate = CMP + 3(3-sn-phosphatidyl)-sn-glycerol 1-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]