| Definition | Vibrio fischeri ES114 chromosome chromosome II, complete sequence. |
|---|---|
| Accession | NC_006841 |
| Length | 1,330,333 |
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The map label for this gene is mshP2
Identifier: 59713259
GI number: 59713259
Start: 83785
End: 84219
Strand: Reverse
Name: mshP2
Synonym: VF_A0076
Alternate gene names: NA
Gene position: 84219-83785 (Counterclockwise)
Preceding gene: 59713260
Following gene: 59713258
Centisome position: 6.33
GC content: 40.69
Gene sequence:
>435_bases ATGACGTCCTTATCGCCAATACGCCTTAATAAATCTCAACGAGGTTCCGCTCTGATTCTGACGATTTTTGTTCTTATCGT CGTCGGTTTTATTGCTTTAATGGCAACGAAGAACCAACAAAAAATGAGCACACATGTAGTGACCTCTATTATGGGAACCA GAACAAACATGGCAGCTCAATCTGGCTCTCAAATTGAGATCAGTCGTTTCTATATGGAAAAAACAGGCAGTTGCTTTGTT GCTGGTAATACACCAAGTGTTTATACCTTCTCGGGTGATGGATTATCGCAATGTAAAGCACAAGTAAAATGCAAACCTAT TGGAACATTAGACTCTGGCCGACAGGTGTACAGTTTAACAAGCACCGCCACCTGTAAATTTGGAACCACCACTTTGCAAC GTATTATTGAAGTAGGTATTCGTAGTGATGACTAA
Upstream 100 bases:
>100_bases CTCGCCACATTCAATGTTGAGCAAGCGTCTTTAGTTCGTAATGGCTTAGTAAAAATGCAATTTGTGTTCACTGATAACAA TGAAGAGGTGCAGTTGGATC
Downstream 100 bases:
>100_bases ACCTTTCTCTCGTTCACTGATTATTTCAGCGTTTAGCTTATGTTTAATGCCATTGAGCGCATTCGCTTTTCCAACGATTA ATCCAAATACTTACTTTCCG
Product: MshP protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTSLSPIRLNKSQRGSALILTIFVLIVVGFIALMATKNQQKMSTHVVTSIMGTRTNMAAQSGSQIEISRFYMEKTGSCFV AGNTPSVYTFSGDGLSQCKAQVKCKPIGTLDSGRQVYSLTSTATCKFGTTTLQRIIEVGIRSDD
Sequences:
>Translated_144_residues MTSLSPIRLNKSQRGSALILTIFVLIVVGFIALMATKNQQKMSTHVVTSIMGTRTNMAAQSGSQIEISRFYMEKTGSCFV AGNTPSVYTFSGDGLSQCKAQVKCKPIGTLDSGRQVYSLTSTATCKFGTTTLQRIIEVGIRSDD >Mature_143_residues TSLSPIRLNKSQRGSALILTIFVLIVVGFIALMATKNQQKMSTHVVTSIMGTRTNMAAQSGSQIEISRFYMEKTGSCFVA GNTPSVYTFSGDGLSQCKAQVKCKPIGTLDSGRQVYSLTSTATCKFGTTTLQRIIEVGIRSDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15528; Mature: 15397
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLSPIRLNKSQRGSALILTIFVLIVVGFIALMATKNQQKMSTHVVTSIMGTRTNMAAQ CCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC SGSQIEISRFYMEKTGSCFVAGNTPSVYTFSGDGLSQCKAQVKCKPIGTLDSGRQVYSLT CCCEEEHHEEEHHCCCCEEEECCCCEEEEECCCCHHHHHHEEEEEECCCCCCCCEEEEEC STATCKFGTTTLQRIIEVGIRSDD CCCEEEECHHHHHHHHHHCCCCCC >Mature Secondary Structure TSLSPIRLNKSQRGSALILTIFVLIVVGFIALMATKNQQKMSTHVVTSIMGTRTNMAAQ CCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHC SGSQIEISRFYMEKTGSCFVAGNTPSVYTFSGDGLSQCKAQVKCKPIGTLDSGRQVYSLT CCCEEEHHEEEHHCCCCEEEECCCCEEEEECCCCHHHHHHEEEEEECCCCCCCCEEEEEC STATCKFGTTTLQRIIEVGIRSDD CCCEEEECHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA