Click here to switch to the map view.

The map label for this gene is 59713253

Identifier: 59713253

GI number: 59713253

Start: 73619

End: 74080

Strand: Reverse

Name: 59713253

Synonym: VF_A0070

Alternate gene names: NA

Gene position: 74080-73619 (Counterclockwise)

Preceding gene: 59713256

Following gene: 59713251

Centisome position: 5.57

GC content: 34.2

Gene sequence:

>462_bases
ATGAAAGCACCTCTTTCGTTCATATCATTATTAGCACTTCTTTCTGGCTGTAGTCCTGAATCCCAATTAATCTCAAATAC
AGTCACTTGTAATAATGACGAATATATATTGTCGTTGCCTGAAGATATTTCTGCATATCGTAATGCGATGGCTGAGTTTT
CACAAATTGGCGGAACAAATCCATTACAATCGACCTCTTATAAAAATAAGTGTATTCCGAAAACATCATTTAAAGATTTA
TCTCAAACAAGTGCTCAAGAGATATTCGATGCAACTTATAAGGATGCAGGCAGAGTGACGCATTTTAGAATCAAAAATAA
TGTCGCTTATGTAGAATTAAAAGCAAATACTGAAGGGTGGAGTGGTGTTTCTGCATCATTAGCCGCAGTCAATCCAATCA
TTAAACGTAATTTATTCTTAAACAGTAAAGTTGAAGAAGTTATTGTTGGCGAAATCAAATAA

Upstream 100 bases:

>100_bases
TGCACTCGCTTCCATAATTATCAAAATAAAGACACCTTTTTGACAGTTTATTCTATAAACTAACTAAATATACTTATAAC
TAACTTGCAGAAAATCAAAA

Downstream 100 bases:

>100_bases
AAAGCCATGATATCTCTACCATGGCTTATATTCTAAATATGACTTTTGATTAATTTACTGAGTAATTAATAGCAATATCT
TCAGAAGAACCTGTGGTTAA

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MKAPLSFISLLALLSGCSPESQLISNTVTCNNDEYILSLPEDISAYRNAMAEFSQIGGTNPLQSTSYKNKCIPKTSFKDL
SQTSAQEIFDATYKDAGRVTHFRIKNNVAYVELKANTEGWSGVSASLAAVNPIIKRNLFLNSKVEEVIVGEIK

Sequences:

>Translated_153_residues
MKAPLSFISLLALLSGCSPESQLISNTVTCNNDEYILSLPEDISAYRNAMAEFSQIGGTNPLQSTSYKNKCIPKTSFKDL
SQTSAQEIFDATYKDAGRVTHFRIKNNVAYVELKANTEGWSGVSASLAAVNPIIKRNLFLNSKVEEVIVGEIK
>Mature_153_residues
MKAPLSFISLLALLSGCSPESQLISNTVTCNNDEYILSLPEDISAYRNAMAEFSQIGGTNPLQSTSYKNKCIPKTSFKDL
SQTSAQEIFDATYKDAGRVTHFRIKNNVAYVELKANTEGWSGVSASLAAVNPIIKRNLFLNSKVEEVIVGEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16741; Mature: 16741

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAPLSFISLLALLSGCSPESQLISNTVTCNNDEYILSLPEDISAYRNAMAEFSQIGGTN
CCCHHHHHHHHHHHCCCCCHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCC
PLQSTSYKNKCIPKTSFKDLSQTSAQEIFDATYKDAGRVTHFRIKNNVAYVELKANTEGW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCC
SGVSASLAAVNPIIKRNLFLNSKVEEVIVGEIK
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC
>Mature Secondary Structure
MKAPLSFISLLALLSGCSPESQLISNTVTCNNDEYILSLPEDISAYRNAMAEFSQIGGTN
CCCHHHHHHHHHHHCCCCCHHHHHHCCEEECCCCEEEECCHHHHHHHHHHHHHHHCCCCC
PLQSTSYKNKCIPKTSFKDLSQTSAQEIFDATYKDAGRVTHFRIKNNVAYVELKANTEGW
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEEEEEECCCCC
SGVSASLAAVNPIIKRNLFLNSKVEEVIVGEIK
CCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA