Click here to switch to the map view.

The map label for this gene is yigL [H]

Identifier: 59713089

GI number: 59713089

Start: 2781615

End: 2782412

Strand: Direct

Name: yigL [H]

Synonym: VF_2482

Alternate gene names: 59713089

Gene position: 2781615-2782412 (Clockwise)

Preceding gene: 59713088

Following gene: 59713093

Centisome position: 96.0

GC content: 38.85

Gene sequence:

>798_bases
ATGATTACCATTGTTGCATCGGATCTTGACGGTACCCTTCTTACTCCAGAGCACAAAGTTGCTGACTTCACGAAAAAAAC
ACTGAACAAATTACACCAGCAAAATTTAACCTTTATTTTTGCAACGGGTCGCCATCATATTGATGTTGGTAATATTCGCA
GTGATGTGGGTATTCCTGCTTATATGATCACATCTAATGGTGCTCGAGTTCATGATGCTGATGATAATTTAATTTACAGC
AAAAATGTTCCAGAAACGTTAGTGCCTCAGGTTATCGACCTACTAAAAAATGATGACCAACTGACAATTCATATGTACTC
AGATACGCAATGGTTCATTAATGCTGAAGATGAGAGCTTAAAAGAATTTCATGACAACGGCTTCACCTACACGGTATTCG
ATGTAAATAATCCACCAGTAGACGATATTGCTAAAGTCTTTGTGACCATGCCTGAACACGAGTATTTAGTTCAATATGAA
GAACAATTAAAAGCACAGTTTGGCGATCAACTTATGGTGGCTTTCTCTACGCCTTGGTGTTTAGAAATCATGGCAGCTGA
AGTATCAAAAGGGGCAGCACTAGAGGCGGTGGCTAAATTACTTGGTAAGACATTAGAAAACTGCATTGCATTTGGTGACG
GCATGAATGACTACGAAATGTTAAGCATGGCTGGCAAAGGTATTGTGATGGGTACATCGCACGAGAAAGTAAAAAAAGCA
CTACCAAATAATGAAGTAATTGGTTCTTCAGCTGACGAAGCCGTTGCTCATTACCTAGAAAACTTATTGCTTAAATAA

Upstream 100 bases:

>100_bases
AGTGACGTAAACTTAGCCTCATTAAACTGAATTCTAATTTTATACTGATGCCGTTTATTGAATGTTCTATTGACTGGCAT
TGGTATTCTCATGAGGCTTT

Downstream 100 bases:

>100_bases
GCTTTTTCACTATTTGGCCTACCATAGGCCAAATAGTTGAAAGCATTGTAATTACATTTAAAATCAATAAATTAAAAAAA
CCAGAGAATTCTCTGGCTTT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MITIVASDLDGTLLTPEHKVADFTKKTLNKLHQQNLTFIFATGRHHIDVGNIRSDVGIPAYMITSNGARVHDADDNLIYS
KNVPETLVPQVIDLLKNDDQLTIHMYSDTQWFINAEDESLKEFHDNGFTYTVFDVNNPPVDDIAKVFVTMPEHEYLVQYE
EQLKAQFGDQLMVAFSTPWCLEIMAAEVSKGAALEAVAKLLGKTLENCIAFGDGMNDYEMLSMAGKGIVMGTSHEKVKKA
LPNNEVIGSSADEAVAHYLENLLLK

Sequences:

>Translated_265_residues
MITIVASDLDGTLLTPEHKVADFTKKTLNKLHQQNLTFIFATGRHHIDVGNIRSDVGIPAYMITSNGARVHDADDNLIYS
KNVPETLVPQVIDLLKNDDQLTIHMYSDTQWFINAEDESLKEFHDNGFTYTVFDVNNPPVDDIAKVFVTMPEHEYLVQYE
EQLKAQFGDQLMVAFSTPWCLEIMAAEVSKGAALEAVAKLLGKTLENCIAFGDGMNDYEMLSMAGKGIVMGTSHEKVKKA
LPNNEVIGSSADEAVAHYLENLLLK
>Mature_265_residues
MITIVASDLDGTLLTPEHKVADFTKKTLNKLHQQNLTFIFATGRHHIDVGNIRSDVGIPAYMITSNGARVHDADDNLIYS
KNVPETLVPQVIDLLKNDDQLTIHMYSDTQWFINAEDESLKEFHDNGFTYTVFDVNNPPVDDIAKVFVTMPEHEYLVQYE
EQLKAQFGDQLMVAFSTPWCLEIMAAEVSKGAALEAVAKLLGKTLENCIAFGDGMNDYEMLSMAGKGIVMGTSHEKVKKA
LPNNEVIGSSADEAVAHYLENLLLK

Specific function: Unknown

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=48.3018867924528, Blast_Score=266, Evalue=9e-73,
Organism=Escherichia coli, GI87081741, Length=264, Percent_Identity=35.2272727272727, Blast_Score=184, Evalue=7e-48,
Organism=Escherichia coli, GI2367265, Length=271, Percent_Identity=26.9372693726937, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786982, Length=277, Percent_Identity=25.2707581227437, Blast_Score=77, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 29464; Mature: 29464

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS01228 COF_1 ; PS01229 COF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIVASDLDGTLLTPEHKVADFTKKTLNKLHQQNLTFIFATGRHHIDVGNIRSDVGIPA
CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCE
YMITSNGARVHDADDNLIYSKNVPETLVPQVIDLLKNDDQLTIHMYSDTQWFINAEDESL
EEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHH
KEFHDNGFTYTVFDVNNPPVDDIAKVFVTMPEHEYLVQYEEQLKAQFGDQLMVAFSTPWC
HHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
LEIMAAEVSKGAALEAVAKLLGKTLENCIAFGDGMNDYEMLSMAGKGIVMGTSHEKVKKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHH
LPNNEVIGSSADEAVAHYLENLLLK
CCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITIVASDLDGTLLTPEHKVADFTKKTLNKLHQQNLTFIFATGRHHIDVGNIRSDVGIPA
CEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCCE
YMITSNGARVHDADDNLIYSKNVPETLVPQVIDLLKNDDQLTIHMYSDTQWFINAEDESL
EEEECCCCEEEECCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHH
KEFHDNGFTYTVFDVNNPPVDDIAKVFVTMPEHEYLVQYEEQLKAQFGDQLMVAFSTPWC
HHHHCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEEECCCHH
LEIMAAEVSKGAALEAVAKLLGKTLENCIAFGDGMNDYEMLSMAGKGIVMGTSHEKVKKA
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEECCCHHHHHHH
LPNNEVIGSSADEAVAHYLENLLLK
CCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]