| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713066
Identifier: 59713066
GI number: 59713066
Start: 2757236
End: 2757568
Strand: Direct
Name: 59713066
Synonym: VF_2459
Alternate gene names: NA
Gene position: 2757236-2757568 (Clockwise)
Preceding gene: 172087779
Following gene: 59713067
Centisome position: 95.16
GC content: 34.83
Gene sequence:
>333_bases ATGCCTGTTACTTATATTATTTTGTTACTTATCTTTATTTTTGCTGCAGCATTTTTATTTAAACGCTTCCAAAGCAAATA TATCTTAGGAGAAAATGCCCCTGAGATGACGGCCGAAGTAACTATTTTAGATAAGCAAATAGTTGAAATCCCAGACACTC AACCCGGAGAAGAAGATCAGGAATTTTGGATTTATGTACAAAAAGGACGATTTGGACCAAAACGAGAATTTGAAGTCGGT GTCCATTATTTTCATGCTCTAAATCCAGGAGATAAAGGTATAATGACTTATCAAGGGCGTAAATTTCATCACTTTGCCTT AAAGCGAGATTAA
Upstream 100 bases:
>100_bases GAAAACCCGCACAAACTCGATAAATACTCCTTATCTATCTTTCTATAAAGAGTAGAATAATGATGAACTTATGTATTTAC TTGCACGTTTAAGGAAAATC
Downstream 100 bases:
>100_bases AGAAATACTAGGGAACCACTTATGACCAATACCATGCTTTCTGCCATTCCATTAACCTCTCTTGCTGGTGTGGGAGCAAA AGTCGCAGAAAAGCTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 109
Protein sequence:
>110_residues MPVTYIILLLIFIFAAAFLFKRFQSKYILGENAPEMTAEVTILDKQIVEIPDTQPGEEDQEFWIYVQKGRFGPKREFEVG VHYFHALNPGDKGIMTYQGRKFHHFALKRD
Sequences:
>Translated_110_residues MPVTYIILLLIFIFAAAFLFKRFQSKYILGENAPEMTAEVTILDKQIVEIPDTQPGEEDQEFWIYVQKGRFGPKREFEVG VHYFHALNPGDKGIMTYQGRKFHHFALKRD >Mature_109_residues PVTYIILLLIFIFAAAFLFKRFQSKYILGENAPEMTAEVTILDKQIVEIPDTQPGEEDQEFWIYVQKGRFGPKREFEVGV HYFHALNPGDKGIMTYQGRKFHHFALKRD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12883; Mature: 12752
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTYIILLLIFIFAAAFLFKRFQSKYILGENAPEMTAEVTILDKQIVEIPDTQPGEEDQ CCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCC EFWIYVQKGRFGPKREFEVGVHYFHALNPGDKGIMTYQGRKFHHFALKRD EEEEEEECCCCCCCCCHHEEEEEEEEECCCCCCEEEECCCEEEEEEEECC >Mature Secondary Structure PVTYIILLLIFIFAAAFLFKRFQSKYILGENAPEMTAEVTILDKQIVEIPDTQPGEEDQ CHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEEEEEECCEEEECCCCCCCCCCC EFWIYVQKGRFGPKREFEVGVHYFHALNPGDKGIMTYQGRKFHHFALKRD EEEEEEECCCCCCCCCHHEEEEEEEEECCCCCCEEEECCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA