| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59713008
Identifier: 59713008
GI number: 59713008
Start: 2688219
End: 2688749
Strand: Reverse
Name: 59713008
Synonym: VF_2401
Alternate gene names: NA
Gene position: 2688749-2688219 (Counterclockwise)
Preceding gene: 59713009
Following gene: 59713006
Centisome position: 92.79
GC content: 38.23
Gene sequence:
>531_bases ATGAGGTCTCCTTTTTTATTGGAACAGAGCTATAATTTTATTGTCATAATTAAAGATAAGAGCAATCAAGAGTCGGTTAT GTTTAAACAATTACGTACATTATTGAAGAAAGTGATTCATGAGGCGACAGAAAGTGGGGCAAGTGAAACCGCATCGATGC ACTTAGCAATGGCCTCACTTTTGTGTGAAGTATCAAACGCGGATCATCAGAGTGATGAGAGAGAAGATACCGCAAAATTA CAGTTACTAATGAAGCTTCTTGACCTTAACGAAGAGTCAGCAAAATTATTGTTATTAGAAGCGATGCAAAAAAGTAAAGC GTCCACATCCTTGTATGAGTTTACAACTAAATTAAGATCACTGATGCCCGAAGAGCGTTATCACTTAATAGAAGCAATGT GGCAAGTGGCTTACGCTGATGGCGTTATAGAGCCAATGGAAGAGGCGGTGATTCGTCAAGTATCAGAGTTAATTTATCTT GATCACTTAGAGTTTATTCGAGCTAAATTAGCGGCTGCACCTAAGGATTAA
Upstream 100 bases:
>100_bases CCTGAAAACGCGGGTGTGTTTGTTGATGCTGTTCATGACTTATCTAAGCCGTATCATAAATAAAATCTTAAATTAAGATT CTAGATAAAAAGGAGACTCA
Downstream 100 bases:
>100_bases TATACTTAGCCTGTTAATTAAACGAGAAACAACAGGCTAAATATTCTAATAGCCCTTAGTAAAATCTATAGAGTTAATTA AAGAGAACCCATCTCGCCAA
Product: protein YhgI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MRSPFLLEQSYNFIVIIKDKSNQESVMFKQLRTLLKKVIHEATESGASETASMHLAMASLLCEVSNADHQSDEREDTAKL QLLMKLLDLNEESAKLLLLEAMQKSKASTSLYEFTTKLRSLMPEERYHLIEAMWQVAYADGVIEPMEEAVIRQVSELIYL DHLEFIRAKLAAAPKD
Sequences:
>Translated_176_residues MRSPFLLEQSYNFIVIIKDKSNQESVMFKQLRTLLKKVIHEATESGASETASMHLAMASLLCEVSNADHQSDEREDTAKL QLLMKLLDLNEESAKLLLLEAMQKSKASTSLYEFTTKLRSLMPEERYHLIEAMWQVAYADGVIEPMEEAVIRQVSELIYL DHLEFIRAKLAAAPKD >Mature_176_residues MRSPFLLEQSYNFIVIIKDKSNQESVMFKQLRTLLKKVIHEATESGASETASMHLAMASLLCEVSNADHQSDEREDTAKL QLLMKLLDLNEESAKLLLLEAMQKSKASTSLYEFTTKLRSLMPEERYHLIEAMWQVAYADGVIEPMEEAVIRQVSELIYL DHLEFIRAKLAAAPKD
Specific function: Unknown
COG id: COG4103
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20107; Mature: 20107
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSPFLLEQSYNFIVIIKDKSNQESVMFKQLRTLLKKVIHEATESGASETASMHLAMASL CCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LCEVSNADHQSDEREDTAKLQLLMKLLDLNEESAKLLLLEAMQKSKASTSLYEFTTKLRS HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMPEERYHLIEAMWQVAYADGVIEPMEEAVIRQVSELIYLDHLEFIRAKLAAAPKD HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRSPFLLEQSYNFIVIIKDKSNQESVMFKQLRTLLKKVIHEATESGASETASMHLAMASL CCCCCCEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LCEVSNADHQSDEREDTAKLQLLMKLLDLNEESAKLLLLEAMQKSKASTSLYEFTTKLRS HHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LMPEERYHLIEAMWQVAYADGVIEPMEEAVIRQVSELIYLDHLEFIRAKLAAAPKD HCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA