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The map label for this gene is ychE [H]

Identifier: 59712982

GI number: 59712982

Start: 2662055

End: 2662678

Strand: Direct

Name: ychE [H]

Synonym: VF_2375

Alternate gene names: 59712982

Gene position: 2662055-2662678 (Clockwise)

Preceding gene: 59712981

Following gene: 59712983

Centisome position: 91.87

GC content: 40.22

Gene sequence:

>624_bases
ATGATAAGTATCCTCGTAACTCAATTTATTGTTCTTTGGGCCGTAATTGACCCTATTGGCTCAGTTCCTGTCTACCTTTC
ACAAACTCAACACCTTTCAGCTAAGCAACGTAAACTGGTTGCCCTAAAAGCCGTTGCTATCGCCACTTTAGTTTTGCTCT
TTTTCCTCATTGTTGGTCAATTATTATTAGAAGCAATGCAAATCCCATTACCGGCTTTTCAGGTTGCGGGTGGTTTAGTG
CTATTAATTTTTGCTCTCACGATGATCTTTGGCGAAAGTAAACCAGAGCAAGAACAAAAAATGAGTGAGGAAATGAGTCA
TTCTGATCTTGCTGATCTTGCCGTATACCCTCTAGCTATCCCATCAATCGCTTCACCGGGGGCTATGATGGCTATCGTCA
TGCTGACCGATAATTCTCGTTACTCCATATTTGATCAATCAATCACAGCGGGTGTCATGCTCGTTGTTCTATTGATAACG
TTAGGTTTATTACTTGGAGCTACATTTATTCAAAAAGTCATTGGTAATGTTGGGGCCGCTATTATTAGTCGAGTCATGGG
GTTAATTTTGGCTGCTGTGGCTGTAAATAACTTGCTCATGGGAATTAAAGATTTCTATTTTTAA

Upstream 100 bases:

>100_bases
AAAATAAATTAAACTCTCTTCTACGCTATACCAATCAATATGACTTCACATCATTGATTGGTATTCCATCCCTCTGTGTA
ACCTAACCTCTGGGAGAATC

Downstream 100 bases:

>100_bases
TCGTTAGACCTTGGTATTAATTAACACAGTATTAACATTAAAAATTCAATAACCACTTCACATAAAACGCTCATATTTTG
GGCGTTTTTCTTTATCCGCT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MISILVTQFIVLWAVIDPIGSVPVYLSQTQHLSAKQRKLVALKAVAIATLVLLFFLIVGQLLLEAMQIPLPAFQVAGGLV
LLIFALTMIFGESKPEQEQKMSEEMSHSDLADLAVYPLAIPSIASPGAMMAIVMLTDNSRYSIFDQSITAGVMLVVLLIT
LGLLLGATFIQKVIGNVGAAIISRVMGLILAAVAVNNLLMGIKDFYF

Sequences:

>Translated_207_residues
MISILVTQFIVLWAVIDPIGSVPVYLSQTQHLSAKQRKLVALKAVAIATLVLLFFLIVGQLLLEAMQIPLPAFQVAGGLV
LLIFALTMIFGESKPEQEQKMSEEMSHSDLADLAVYPLAIPSIASPGAMMAIVMLTDNSRYSIFDQSITAGVMLVVLLIT
LGLLLGATFIQKVIGNVGAAIISRVMGLILAAVAVNNLLMGIKDFYF
>Mature_207_residues
MISILVTQFIVLWAVIDPIGSVPVYLSQTQHLSAKQRKLVALKAVAIATLVLLFFLIVGQLLLEAMQIPLPAFQVAGGLV
LLIFALTMIFGESKPEQEQKMSEEMSHSDLADLAVYPLAIPSIASPGAMMAIVMLTDNSRYSIFDQSITAGVMLVVLLIT
LGLLLGATFIQKVIGNVGAAIISRVMGLILAAVAVNNLLMGIKDFYF

Specific function: Unknown

COG id: COG2095

COG function: function code U; Multiple antibiotic transporter

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0056 (marC) family [H]

Homologues:

Organism=Escherichia coli, GI1787494, Length=202, Percent_Identity=29.7029702970297, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787809, Length=200, Percent_Identity=28, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789842, Length=203, Percent_Identity=25.615763546798, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002771 [H]

Pfam domain/function: PF01914 MarC [H]

EC number: NA

Molecular weight: Translated: 22230; Mature: 22230

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISILVTQFIVLWAVIDPIGSVPVYLSQTQHLSAKQRKLVALKAVAIATLVLLFFLIVGQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLEAMQIPLPAFQVAGGLVLLIFALTMIFGESKPEQEQKMSEEMSHSDLADLAVYPLAI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PSIASPGAMMAIVMLTDNSRYSIFDQSITAGVMLVVLLITLGLLLGATFIQKVIGNVGAA
CCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISRVMGLILAAVAVNNLLMGIKDFYF
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISILVTQFIVLWAVIDPIGSVPVYLSQTQHLSAKQRKLVALKAVAIATLVLLFFLIVGQ
CHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLEAMQIPLPAFQVAGGLVLLIFALTMIFGESKPEQEQKMSEEMSHSDLADLAVYPLAI
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PSIASPGAMMAIVMLTDNSRYSIFDQSITAGVMLVVLLITLGLLLGATFIQKVIGNVGAA
CCCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IISRVMGLILAAVAVNNLLMGIKDFYF
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]