| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is astA [H]
Identifier: 59712890
GI number: 59712890
Start: 2565398
End: 2566414
Strand: Reverse
Name: astA [H]
Synonym: VF_2283
Alternate gene names: 59712890
Gene position: 2566414-2565398 (Counterclockwise)
Preceding gene: 59712891
Following gene: 59712889
Centisome position: 88.57
GC content: 39.13
Gene sequence:
>1017_bases ATGCTTGTTATCCGTCCTATTACTCAAGAAGATTATCCAGCCCTTCATCAATGTGCCGTTGAATCTGGACATGGGTTCAC TTCACTTCCTGTTAATGAAGAACAATTAAGAAATCGAATCGATCATTCGATAGATAGCTTTCAGAAAGACGTGACAGAGC CAGGTGTTGAAGGCTACCTCATGGTTGGTCAAGATTCGGTTACAGGAGAGGTGACTGGCACAACCGGTATTGAAGCAGCT GTCGGTTTAGATTCACCATTCTATAATTATCATATTAGTAAAGTCGTGCATTTTTCTCGCAAATTAGATGTGCATAATGT CGTGAAAGTGCTGACATTTGGTAGTAATTACACAGGAAGTACAGAGATCTGTACCTTATTTCTTCGTCCTGAATATCGTG AAGGGCTGAATGGACGTTTAATGTCAAAAGCTCGATTTTTGATGATGGCAGAACACCCTCACCGCTTCTCCGATACCATT TTTGCTGAAATGCGCGGTGTTTCAGATAAAGAAGGTGAATCGCCATTTTGGAAGTGGCTACAAAAGCATTTTTTCTCTAT CGATTTTACTGAAGCTGATTACTTAACTGGCATTGGATACAAGGGATTTATTGCTGATTTAATGCCGAAATTACCAATTT ATGTCAGCTTATTAAGCAAAGAAGCTCAGGCTGTAATCGGTAAAGTTCATGATAATACAAAACCTGCTTTAAAACTTTTA GAGAATGAAGGGTTCCGTTGTCGTGGCTACGTAGATATTTTTGATGCAGGCCCAACAGTTGAATGTGATTTACGCAGTAT AGAGTCAGTTCGTAATTCGTTTAAAGCTAAAGTAATTATTACAGAGCACAGCAGTTCACAACAGTATTTGATTGCAAATA CGTCATTTGAAAATTTTAGAGCAACCGCAACAACGGCTGCTTATGATAAAGCCACTGATACTGTTCATTTAACACCAGAC GCAGCAGAAGCATTGCAAGTTGACGTTGATGATTACGTACGTTTATTAGCTCAATAG
Upstream 100 bases:
>100_bases TTAGATAAGGCGCTTGCTTCTCTAACGAAATAACGCTTTAAAGAATATTAGGCAACTCATGGTCGAGTTGCCTTTGTTTT TGGCATCGGAGGGAATATTG
Downstream 100 bases:
>100_bases GGGACAAAGAATATGACACATTGGATTGCAGGTGATTGGGTTTTAGGCGAAGGTGAAACGATACAATCGTTAAGTCCTTA TAACAGTGAGGTGGTGTGGA
Product: arginine succinyltransferase
Products: NA
Alternate protein names: AST; AOST [H]
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLVIRPITQEDYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSIDSFQKDVTEPGVEGYLMVGQDSVTGEVTGTTGIEAA VGLDSPFYNYHISKVVHFSRKLDVHNVVKVLTFGSNYTGSTEICTLFLRPEYREGLNGRLMSKARFLMMAEHPHRFSDTI FAEMRGVSDKEGESPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQAVIGKVHDNTKPALKLL ENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHSSSQQYLIANTSFENFRATATTAAYDKATDTVHLTPD AAEALQVDVDDYVRLLAQ
Sequences:
>Translated_338_residues MLVIRPITQEDYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSIDSFQKDVTEPGVEGYLMVGQDSVTGEVTGTTGIEAA VGLDSPFYNYHISKVVHFSRKLDVHNVVKVLTFGSNYTGSTEICTLFLRPEYREGLNGRLMSKARFLMMAEHPHRFSDTI FAEMRGVSDKEGESPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQAVIGKVHDNTKPALKLL ENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHSSSQQYLIANTSFENFRATATTAAYDKATDTVHLTPD AAEALQVDVDDYVRLLAQ >Mature_338_residues MLVIRPITQEDYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSIDSFQKDVTEPGVEGYLMVGQDSVTGEVTGTTGIEAA VGLDSPFYNYHISKVVHFSRKLDVHNVVKVLTFGSNYTGSTEICTLFLRPEYREGLNGRLMSKARFLMMAEHPHRFSDTI FAEMRGVSDKEGESPFWKWLQKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQAVIGKVHDNTKPALKLL ENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHSSSQQYLIANTSFENFRATATTAAYDKATDTVHLTPD AAEALQVDVDDYVRLLAQ
Specific function: Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine [H]
COG id: COG3138
COG function: function code E; Arginine/ornithine N-succinyltransferase beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the arginine N-succinyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1788043, Length=340, Percent_Identity=46.4705882352941, Blast_Score=310, Evalue=8e-86,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007041 - InterPro: IPR017650 [H]
Pfam domain/function: PF04958 AstA [H]
EC number: =2.3.1.109 [H]
Molecular weight: Translated: 37880; Mature: 37880
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVIRPITQEDYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSIDSFQKDVTEPGVEGYL CEEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE MVGQDSVTGEVTGTTGIEAAVGLDSPFYNYHISKVVHFSRKLDVHNVVKVLTFGSNYTGS EECCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC TEICTLFLRPEYREGLNGRLMSKARFLMMAEHPHRFSDTIFAEMRGVSDKEGESPFWKWL CEEEEEEECCHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHH QKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQAVIGKVHDNTKPALKLL HHHHCEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHSSSQQYLIANTSFENFR HCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECCCCCCE ATATTAAYDKATDTVHLTPDAAEALQVDVDDYVRLLAQ EEEEHHHHCCCCCEEEECCCCHHHEEECHHHHHHHHCC >Mature Secondary Structure MLVIRPITQEDYPALHQCAVESGHGFTSLPVNEEQLRNRIDHSIDSFQKDVTEPGVEGYL CEEEECCCCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEE MVGQDSVTGEVTGTTGIEAAVGLDSPFYNYHISKVVHFSRKLDVHNVVKVLTFGSNYTGS EECCCCCCEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC TEICTLFLRPEYREGLNGRLMSKARFLMMAEHPHRFSDTIFAEMRGVSDKEGESPFWKWL CEEEEEEECCHHHCCCCCHHHHHHHEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHHH QKHFFSIDFTEADYLTGIGYKGFIADLMPKLPIYVSLLSKEAQAVIGKVHDNTKPALKLL HHHHCEEECCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH ENEGFRCRGYVDIFDAGPTVECDLRSIESVRNSFKAKVIITEHSSSQQYLIANTSFENFR HCCCCEEEEEEEEECCCCCEEEHHHHHHHHHHCCEEEEEEEECCCCCEEEEEECCCCCCE ATATTAAYDKATDTVHLTPDAAEALQVDVDDYVRLLAQ EEEEHHHHCCCCCEEEECCCCHHHEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA