| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is folB [H]
Identifier: 59712854
GI number: 59712854
Start: 2523321
End: 2523674
Strand: Reverse
Name: folB [H]
Synonym: VF_2247
Alternate gene names: 59712854
Gene position: 2523674-2523321 (Counterclockwise)
Preceding gene: 59712856
Following gene: 59712853
Centisome position: 87.1
GC content: 37.29
Gene sequence:
>354_bases ATGGATTTAGTATTTATAAAACAGCTTGAAGTAATTACCACCATTGGTGTTTATGAATGGGAACAGGGAATTAAACAAAA GCTCGTATTAGATATTGATATGGCTCACGATAACAAACCAGCAGCAAAATCCGACGATGTTGAGCATTGTTTAAATTATG CAGAAGTGAGCGAAGCAGTAACAGAGTATATTCAAAATGGTCGATTTTTATTAGTTGAACGTGTAGCTGAAGAAATTGCC GAGCTAATCATGACTCGTTTTTCTGTTCCTTGGGTTCGAATTCATTTATCTAAACCTGGTGCAGTTGTAAATGCGCATAG CGTCGGTGTTGTGATTGAGCGAGGAAGTAAATGA
Upstream 100 bases:
>100_bases TTATAGTATATTGCTCGACACATTGAGCAAAGTAATATCAATATTACGTTGTTTTTCTTTTGATGGGTATCCGACCTCTT AATAAAAAGTGTGATCAAAG
Downstream 100 bases:
>100_bases TCACAACTTATATTGGCATTGGCTCCAATATTGAACCAGAAAAGCATGTAAAGGCTGCGATAGATGAGTTAAAGCTGTTA GGAAGCATTACTCAAATATC
Product: bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MDLVFIKQLEVITTIGVYEWEQGIKQKLVLDIDMAHDNKPAAKSDDVEHCLNYAEVSEAVTEYIQNGRFLLVERVAEEIA ELIMTRFSVPWVRIHLSKPGAVVNAHSVGVVIERGSK
Sequences:
>Translated_117_residues MDLVFIKQLEVITTIGVYEWEQGIKQKLVLDIDMAHDNKPAAKSDDVEHCLNYAEVSEAVTEYIQNGRFLLVERVAEEIA ELIMTRFSVPWVRIHLSKPGAVVNAHSVGVVIERGSK >Mature_117_residues MDLVFIKQLEVITTIGVYEWEQGIKQKLVLDIDMAHDNKPAAKSDDVEHCLNYAEVSEAVTEYIQNGRFLLVERVAEEIA ELIMTRFSVPWVRIHLSKPGAVVNAHSVGVVIERGSK
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin. Can use L-threo-dihydroneopterin and D-erythro-dihydroneopterin as substrates for the formation of 6-hydroxymethyldihydropterin, but it can also catalyze the epimeriza
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
Organism=Escherichia coli, GI87082204, Length=117, Percent_Identity=65.8119658119658, Blast_Score=167, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6324073, Length=88, Percent_Identity=32.9545454545455, Blast_Score=61, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13190; Mature: 13190
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVFIKQLEVITTIGVYEWEQGIKQKLVLDIDMAHDNKPAAKSDDVEHCLNYAEVSEAV CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH TEYIQNGRFLLVERVAEEIAELIMTRFSVPWVRIHLSKPGAVVNAHSVGVVIERGSK HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEECCCC >Mature Secondary Structure MDLVFIKQLEVITTIGVYEWEQGIKQKLVLDIDMAHDNKPAAKSDDVEHCLNYAEVSEAV CCEEEHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH TEYIQNGRFLLVERVAEEIAELIMTRFSVPWVRIHLSKPGAVVNAHSVGVVIERGSK HHHHHCCCEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]