| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is bacA
Identifier: 59712852
GI number: 59712852
Start: 2522023
End: 2522826
Strand: Reverse
Name: bacA
Synonym: VF_2245
Alternate gene names: 59712852
Gene position: 2522826-2522023 (Counterclockwise)
Preceding gene: 59712853
Following gene: 59712850
Centisome position: 87.07
GC content: 38.06
Gene sequence:
>804_bases ATGACGTACTTTGAAGCTTTCTTTCTTGCTCTTCTGCAAGGATTCACAGAGTTTTTACCTATCTCAAGTTCAGCTCATTT AATTTTACCCTCTGCAATTTTAGGCTGGTCAGATCAAGGTTTAGCTTTTGATGTCGCCGTTCACGTTGGAACATTAGCCG CGGTGGTTATCTACTTTAGAAAAGAAGTGGTGACATTATTAACAGCTTGGGTCGGTTCTATTGTAAAAAAAGAGCATAAC AAGGAATCAAATTTGGCTTGGTTAATCGTGTTAGCTACGATTCCAGCGGCTTTATTTGGCTTACTATTTAAAGATTTTAT TGAAATATATTTACGTAGTGCATGGGTTATTGCTGCAACAACGATTGTTTTTGGTTTATTGCTTTGGTGGGTAGATAAAA ATGCAACGTTAGCAAAAGATGAGTACCAAATGACGTGGAAAAAAGCGTTATTTTTAGGTATCGCTCAGGCAATGGCGATG ATCCCAGGTACTTCTCGTTCAGGAATCACAATTACCGCAGCGCTGTATCTTGGATTTACTCGTGAGGCAGCGGCACGTTT TTCTTTCCTAATGTCCATTCCAATTATTACACTTGCTGGATCTTATCTTGGTCTTAAATTAGCGATGAGTGATATTTCAA TTCACTTAGGCTTATTAAGTACTGGTGTGATTGTCTCTTTTATTAGTGCCTATATCTGTATTCATTTCTTTTTGAAGCTG ATTTCAAGTATGGGGATGATGCCGTTTGTTATCTACCGTATCTTATTAGGTTCAAGCCTATTGGTATGGTTAGCTTTGCA CTAG
Upstream 100 bases:
>100_bases ACCTGGTACAAAAACAACCATTAGTGAGATATGGAATCATTTCACTCACAATCAATCACTCAAACCCGCGTTAATTAACT TAAGGTCTTAATGGAATATC
Downstream 100 bases:
>100_bases AGACTAGAGACTAGAGACTAGAGACTAGAGACGATAGAGCAAGTATTGCTAGAGTGACAATGTTCTAGGCTTTAGGATAT TATGCTTGCAGGTTTTGGGT
Product: undecaprenyl pyrophosphate phosphatase
Products: NA
Alternate protein names: Bacitracin resistance protein; Undecaprenyl pyrophosphate phosphatase
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MTYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFRKEVVTLLTAWVGSIVKKEHN KESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAATTIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAM IPGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKL ISSMGMMPFVIYRILLGSSLLVWLALH
Sequences:
>Translated_267_residues MTYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFRKEVVTLLTAWVGSIVKKEHN KESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAATTIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAM IPGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKL ISSMGMMPFVIYRILLGSSLLVWLALH >Mature_266_residues TYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFRKEVVTLLTAWVGSIVKKEHNK ESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAATTIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAMI PGTSRSGITITAALYLGFTREAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKLI SSMGMMPFVIYRILLGSSLLVWLALH
Specific function: Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin
COG id: COG1968
COG function: function code V; Uncharacterized bacitracin resistance protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uppP family
Homologues:
Organism=Escherichia coli, GI1789437, Length=263, Percent_Identity=33.4600760456274, Blast_Score=130, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UPPP_VIBF1 (Q5E2K6)
Other databases:
- EMBL: CP000020 - RefSeq: YP_205628.1 - STRING: Q5E2K6 - GeneID: 3279448 - GenomeReviews: CP000020_GR - KEGG: vfi:VF_2245 - NMPDR: fig|312309.3.peg.2244 - eggNOG: COG1968 - HOGENOM: HBG391969 - OMA: HSMYWFV - PhylomeDB: Q5E2K6 - ProtClustDB: PRK00281 - BioCyc: VFIS312309:VF2245-MONOMER - GO: GO:0016311 - HAMAP: MF_01006 - InterPro: IPR003824 - TIGRFAMs: TIGR00753
Pfam domain/function: PF02673 BacA
EC number: =3.6.1.27
Molecular weight: Translated: 29425; Mature: 29293
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x12d2932c)-; HASH(0x131eddb8)-; HASH(0x131ead38)-; HASH(0x131eab4c)-; HASH(0x131ee064)-; HASH(0x131ca760)-; HASH(0x131ca778)-; HASH(0x1317e17c)-;
Cys/Met content:
0.4 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFR CCHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH KEVVTLLTAWVGSIVKKEHNKESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAAT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAMIPGTSRSGITITAALYLGFT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH REAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSMGMMPFVIYRILLGSSLLVWLALH HHHCCHHHHHHHHHHHCCHHHHHEECH >Mature Secondary Structure TYFEAFFLALLQGFTEFLPISSSAHLILPSAILGWSDQGLAFDVAVHVGTLAAVVIYFR CHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHH KEVVTLLTAWVGSIVKKEHNKESNLAWLIVLATIPAALFGLLFKDFIEIYLRSAWVIAAT HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TIVFGLLLWWVDKNATLAKDEYQMTWKKALFLGIAQAMAMIPGTSRSGITITAALYLGFT HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHH REAAARFSFLMSIPIITLAGSYLGLKLAMSDISIHLGLLSTGVIVSFISAYICIHFFLKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSMGMMPFVIYRILLGSSLLVWLALH HHHCCHHHHHHHHHHHCCHHHHHEECH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA