| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712801
Identifier: 59712801
GI number: 59712801
Start: 2466075
End: 2466542
Strand: Direct
Name: 59712801
Synonym: VF_2194
Alternate gene names: NA
Gene position: 2466075-2466542 (Clockwise)
Preceding gene: 59712798
Following gene: 59712818
Centisome position: 85.11
GC content: 39.74
Gene sequence:
>468_bases ATGCGAGACCATAGACCACAACCGGCAAACGATTTTTTCAATAATACTCGTTTTAAAGATCTGCAAGAAAAAGCGATCAT TTTGTCAAAGCTATCTCATGTACTTGAAGATGCACTGCCTACAGGCTGTGAAAATCATTGCCGTGTGGCAAATTATCGCC AAGGATCATTGGTGATCGAGGTATCAAGTAGTGTTTGGGCAACAAGAATTAATTACGAAAGACTAACTTTGTTGTCTGTT TTTCGTAAGCATGGCTTACCTGGTCTTTCTAACTTAGAAGTAAAGATCAACCCTGATCTTGCTCGATCTTTTGTCGGTGA AAAACCTGCCGTTTATAAATCAGAGAAACAAGCAAAACGTGAGCTATCTGCTGCGGCCGCAAGTGCATTAGAGATGGTAG CAGAAACAGCATCTCCTAAATTAAAAAAGCGTTTAGAAAGTCTCGCTGCATTAGCAAATAGAAAGTAA
Upstream 100 bases:
>100_bases TTTGATTTCAATTCTGAAAAATTCAGATCTAATTGGCATTTATTACTTTTTCTTTAGTACTCACCACCAAATAACGCACG ATTTATAAGAGTTTTTAGTG
Downstream 100 bases:
>100_bases GAAGTAGAACTAAGAAAATATTAGATACAAAAAAGCCAAGCATTCGCTTGGCTTTTTTAATTTGATGATGTGTTACTTAC GCAAGTACCATTCCTGGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRDHRPQPANDFFNNTRFKDLQEKAIILSKLSHVLEDALPTGCENHCRVANYRQGSLVIEVSSSVWATRINYERLTLLSV FRKHGLPGLSNLEVKINPDLARSFVGEKPAVYKSEKQAKRELSAAAASALEMVAETASPKLKKRLESLAALANRK
Sequences:
>Translated_155_residues MRDHRPQPANDFFNNTRFKDLQEKAIILSKLSHVLEDALPTGCENHCRVANYRQGSLVIEVSSSVWATRINYERLTLLSV FRKHGLPGLSNLEVKINPDLARSFVGEKPAVYKSEKQAKRELSAAAASALEMVAETASPKLKKRLESLAALANRK >Mature_155_residues MRDHRPQPANDFFNNTRFKDLQEKAIILSKLSHVLEDALPTGCENHCRVANYRQGSLVIEVSSSVWATRINYERLTLLSV FRKHGLPGLSNLEVKINPDLARSFVGEKPAVYKSEKQAKRELSAAAASALEMVAETASPKLKKRLESLAALANRK
Specific function: Unknown
COG id: COG4701
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17328; Mature: 17328
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDHRPQPANDFFNNTRFKDLQEKAIILSKLSHVLEDALPTGCENHCRVANYRQGSLVIE CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE VSSSVWATRINYERLTLLSVFRKHGLPGLSNLEVKINPDLARSFVGEKPAVYKSEKQAKR ECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHH ELSAAAASALEMVAETASPKLKKRLESLAALANRK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRDHRPQPANDFFNNTRFKDLQEKAIILSKLSHVLEDALPTGCENHCRVANYRQGSLVIE CCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEE VSSSVWATRINYERLTLLSVFRKHGLPGLSNLEVKINPDLARSFVGEKPAVYKSEKQAKR ECCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHCCCCCHHHHHHHHHH ELSAAAASALEMVAETASPKLKKRLESLAALANRK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA