Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

Click here to switch to the map view.

The map label for this gene is fbpB2 [H]

Identifier: 59712757

GI number: 59712757

Start: 2406654

End: 2408285

Strand: Reverse

Name: fbpB2 [H]

Synonym: VF_2150

Alternate gene names: 59712757

Gene position: 2408285-2406654 (Counterclockwise)

Preceding gene: 59712758

Following gene: 59712756

Centisome position: 83.11

GC content: 39.03

Gene sequence:

>1632_bases
ATGAAAGAAAAATTATTATTTTGGAAAACCAGTAGTTGGAGTTTTTCTCTACTACTGGTTTTGCCGATCTTAGCGATCCT
ATATACAGCGCTCGGTAATACAGACGATATATTTACTCATCTGTTTGATACTGTGCTTCCTACATACACACTCAATACGG
TTTTATTAGTGTTTGGTGCGATGTTCTTCTCTCTTATTTTGGGTGTCCCTTCAGCTTGGTTTATGGCAATGTGCCGCATT
CCTAGCTCTTCTATTTTGCAATGGGCTTTGGTTTTGCCTCTTGCTATGCCTGCTTATATCGTTGGGTACATCTACACAGA
TTGGTTAGATTTTGCTGGCCCAATACAAGTGTTATTACGTGATATTTTTGGCTGGCAGTCATACAGCGATTATTGGTTTC
CAGATATTCGTACATTAGCTGGAGCCATTTTAGTCATGTCTTTAGTTTTGTATCCTTATGTTTATTTATTAGCTCGTGCT
GCTTTTATGGAGCAGAACATCAGTCTGTTGCAGTCGGCTCGATTACTAAAATGTACTCCTTGGGAGAGTTTTAAACGCAT
CTCTTTACCTCTTGCTAGACCATCGATTGCTGTTGCCTTGTCATTAGTGGCAATGGAAGCACTAGGTGATTTTGGTACCG
TTAGCTATTTTGCTGTGAATACGTTAACGACGGCGGTGTATGATACTTGGCTTGGCTATTCAAATTTAAATGCGGCGGCT
AAGGTTTCTGCTTTTATGCTGATGGGTATTTTATTATTGATCAGTGGTGAACGTTATAGCCGACGTAAACAAAAAATGTT
TCAAGAAAAATTTAATACGAGCGAGGAATTTCAATATCAATTGTATGGTTGGAAAAAGTGGGGAGCATTAATTTGGTGTT
GGGGACTTGTTTCAATCGCTTTTATTTTCCCATTAATGCAGTTAATCAGTTATGCAATTGATTACTTTGAGCAAAGCTGG
ACTGCTGAGTTTCAAGAATATGCCATCAATAGTTTATATGTCTCTAGTATTTCTGCTGTCATTGCCGTAATCATTGCTGT
TGTAGTGAATTTTTTACGTCGCTTACAGCCTGCTAGTAAATGGAGCGTTGTTCCTATGCGTTTAGCTTCATTAGGCTATG
CTGTGCCAGGAACGGTGTTAGCGATTGGCGTTATGCTACCTATGATTGGTTTGGATCATTTTATTAATGATGTATCAAAA
CAACTTGGTTTTGGGGTTATTGGTCTAATTTTCTCTGGCTCTATTTTTGCGTTAATTTTTGCTTCTGTAACTCGATTTTC
AGCGGTCGCTATCGGTTCTATTGAAAGTAACTTAAATAAGATACCACCTTCATTAGATATGGCTTCTCGCACATTGGGAT
GTGGGACTTGGTCTATGCTGCGTCGAGTGCACTTTCCACTGATTCGTCGAGGGTGTTTAATTGCGGGGCTTCTAGTGTTC
ATTGAAACCATGAAAGAGCTCAATGCAGCGTTATTATTGCGTCCATTTAATTTTGAAACACTAGCAACTTACGTGTTTAA
TTTTGCTTCTGATGAGCAACTAGAAATCGCAGCGATGCCTGCGGTGCTATTGGTTTTAGTGGGGTTAATTCCATTAATTA
TTGTTAACCGTTCTTTGGAGCAACATCATTAA

Upstream 100 bases:

>100_bases
AAGCTTTTAGATGAAGTTAAATTCGATCTTTAATTTGATATTTAAAAATGGTGAGGTAACAATACCTCATCATTTTTATA
AGAGCCTTGCAGTTTAGGCA

Downstream 100 bases:

>100_bases
TGAAATCTGCATTATCTATTTCAAATTTGACTTGTCGCTATCACGATCAAGATATCTTATCTCAGCTTTCATTAAATGTT
GAACAAGGTGAGATCGTTTG

Product: iron(III)-transport system permease protein SfuB

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]

Number of amino acids: Translated: 543; Mature: 543

Protein sequence:

>543_residues
MKEKLLFWKTSSWSFSLLLVLPILAILYTALGNTDDIFTHLFDTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSSSILQWALVLPLAMPAYIVGYIYTDWLDFAGPIQVLLRDIFGWQSYSDYWFPDIRTLAGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTSEEFQYQLYGWKKWGALIWCWGLVSIAFIFPLMQLISYAIDYFEQSW
TAEFQEYAINSLYVSSISAVIAVIIAVVVNFLRRLQPASKWSVVPMRLASLGYAVPGTVLAIGVMLPMIGLDHFINDVSK
QLGFGVIGLIFSGSIFALIFASVTRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLEQHH

Sequences:

>Translated_543_residues
MKEKLLFWKTSSWSFSLLLVLPILAILYTALGNTDDIFTHLFDTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSSSILQWALVLPLAMPAYIVGYIYTDWLDFAGPIQVLLRDIFGWQSYSDYWFPDIRTLAGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTSEEFQYQLYGWKKWGALIWCWGLVSIAFIFPLMQLISYAIDYFEQSW
TAEFQEYAINSLYVSSISAVIAVIIAVVVNFLRRLQPASKWSVVPMRLASLGYAVPGTVLAIGVMLPMIGLDHFINDVSK
QLGFGVIGLIFSGSIFALIFASVTRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLEQHH
>Mature_543_residues
MKEKLLFWKTSSWSFSLLLVLPILAILYTALGNTDDIFTHLFDTVLPTYTLNTVLLVFGAMFFSLILGVPSAWFMAMCRI
PSSSILQWALVLPLAMPAYIVGYIYTDWLDFAGPIQVLLRDIFGWQSYSDYWFPDIRTLAGAILVMSLVLYPYVYLLARA
AFMEQNISLLQSARLLKCTPWESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTSEEFQYQLYGWKKWGALIWCWGLVSIAFIFPLMQLISYAIDYFEQSW
TAEFQEYAINSLYVSSISAVIAVIIAVVVNFLRRLQPASKWSVVPMRLASLGYAVPGTVLAIGVMLPMIGLDHFINDVSK
QLGFGVIGLIFSGSIFALIFASVTRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLEQHH

Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1178

COG function: function code P; ABC-type Fe3+ transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transmembrane type-1 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 60866; Mature: 60866

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEKLLFWKTSSWSFSLLLVLPILAILYTALGNTDDIFTHLFDTVLPTYTLNTVLLVFGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFSLILGVPSAWFMAMCRIPSSSILQWALVLPLAMPAYIVGYIYTDWLDFAGPIQVLLR
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DIFGWQSYSDYWFPDIRTLAGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTSEEFQYQLYGWKKWGALIWCWGLVSIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEHEECHHHHHHHHHHHHHHHHH
FIFPLMQLISYAIDYFEQSWTAEFQEYAINSLYVSSISAVIAVIIAVVVNFLRRLQPASK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WSVVPMRLASLGYAVPGTVLAIGVMLPMIGLDHFINDVSKQLGFGVIGLIFSGSIFALIF
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASVTRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE
HHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
QHH
CCC
>Mature Secondary Structure
MKEKLLFWKTSSWSFSLLLVLPILAILYTALGNTDDIFTHLFDTVLPTYTLNTVLLVFGA
CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
MFFSLILGVPSAWFMAMCRIPSSSILQWALVLPLAMPAYIVGYIYTDWLDFAGPIQVLLR
HHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DIFGWQSYSDYWFPDIRTLAGAILVMSLVLYPYVYLLARAAFMEQNISLLQSARLLKCTP
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCC
WESFKRISLPLARPSIAVALSLVAMEALGDFGTVSYFAVNTLTTAVYDTWLGYSNLNAAA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHH
KVSAFMLMGILLLISGERYSRRKQKMFQEKFNTSEEFQYQLYGWKKWGALIWCWGLVSIA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHEEHEECHHHHHHHHHHHHHHHHH
FIFPLMQLISYAIDYFEQSWTAEFQEYAINSLYVSSISAVIAVIIAVVVNFLRRLQPASK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
WSVVPMRLASLGYAVPGTVLAIGVMLPMIGLDHFINDVSKQLGFGVIGLIFSGSIFALIF
CCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
ASVTRFSAVAIGSIESNLNKIPPSLDMASRTLGCGTWSMLRRVHFPLIRRGCLIAGLLVF
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
IETMKELNAALLLRPFNFETLATYVFNFASDEQLEIAAMPAVLLVLVGLIPLIIVNRSLE
HHHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
QHH
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800; 7927717 [H]