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The map label for this gene is yadS [C]

Identifier: 59712737

GI number: 59712737

Start: 2376123

End: 2376734

Strand: Direct

Name: yadS [C]

Synonym: VF_2130

Alternate gene names: 59712737

Gene position: 2376123-2376734 (Clockwise)

Preceding gene: 59712736

Following gene: 59712738

Centisome position: 82.0

GC content: 41.83

Gene sequence:

>612_bases
ATGTTAATCTATACAATTGATATGTTTGGTACTGCCATTTTCGCCATTTCAGGAGTGTTACTGGCTGGTCGATTAAAAAT
GGACCCATTTGGCGTCACCGTTTTAGCAAGTGTTACCGCAATAGGTGGCGGTACGATAAGGGATATGGCTTTAGGTGCAA
CTCCCGTTTTCTGGATTAACGACACCAATTATTTATTGGTCATTTTCATTACCTGCATTTTAACTATGTTAATCATCAGA
AGACCTAGACGCCTACCTTGGTATGTACTTCCCGTTTCCGATGCTATTGGATTAGCTGTCTTTGTTGGGATTGGTGTAGA
AAAAGCACTTAATTACAATGCAGATCCAATGGTCGCCGTTATTATGGGGGTAATTACAGGTTGCGGCGGCGGCATTATTC
GAGATGTACTAGCCAGAGAAGTCCCTATGGTATTAAGAAGTGAAGTGTATGCTACTGCGTGCATTCTTGGTGGCATCGTT
CATACTTCTGCTCTAGAGTTCAATGTTCAAAGCTCTACAGCAATGTTACTGGGTGTAACTGCTACGCTAATTATTCGATT
AGCTGCAATCCGTTGGCACTTATCGTTACCGACCTTCGCTCTTAATAAATAA

Upstream 100 bases:

>100_bases
AGCGATTTGGCTCATTCTTCAAAGCTCAATAATGGTCATATTAAAACAAGGTTTATAACTTTCTTTCAACAACATCATGC
AGTAAGTCATAGAGGACAAG

Downstream 100 bases:

>100_bases
TTTAAATAGGCCATAGCTATATATATGGCCTCATATTTGACCTGTTTTTATTTATTTCTTTAAATTAATGAACTTTTTTT
TATAAAAAGGTGACCAAACT

Product: inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWINDTNYLLVIFITCILTMLIIR
RPRRLPWYVLPVSDAIGLAVFVGIGVEKALNYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVQSSTAMLLGVTATLIIRLAAIRWHLSLPTFALNK

Sequences:

>Translated_203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWINDTNYLLVIFITCILTMLIIR
RPRRLPWYVLPVSDAIGLAVFVGIGVEKALNYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVQSSTAMLLGVTATLIIRLAAIRWHLSLPTFALNK
>Mature_203_residues
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWINDTNYLLVIFITCILTMLIIR
RPRRLPWYVLPVSDAIGLAVFVGIGVEKALNYNADPMVAVIMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIV
HTSALEFNVQSSTAMLLGVTATLIIRLAAIRWHLSLPTFALNK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=66.1764705882353, Blast_Score=250, Evalue=5e-68,
Organism=Escherichia coli, GI87082304, Length=179, Percent_Identity=34.0782122905028, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 21754; Mature: 21754

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWIN
CEEEEEHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEC
DTNYLLVIFITCILTMLIIRRPRRLPWYVLPVSDAIGLAVFVGIGVEKALNYNADPMVAV
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCHHHHCCCCCCHHHHH
IMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIVHTSALEFNVQSSTAMLLGVT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH
ATLIIRLAAIRWHLSLPTFALNK
HHHHHHHHHHHHEECCCEEECCC
>Mature Secondary Structure
MLIYTIDMFGTAIFAISGVLLAGRLKMDPFGVTVLASVTAIGGGTIRDMALGATPVFWIN
CEEEEEHHHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHCCCCCHHHHHCCCCEEEEEC
DTNYLLVIFITCILTMLIIRRPRRLPWYVLPVSDAIGLAVFVGIGVEKALNYNADPMVAV
CCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHCCHHHHCCCCCCHHHHH
IMGVITGCGGGIIRDVLAREVPMVLRSEVYATACILGGIVHTSALEFNVQSSTAMLLGVT
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH
ATLIIRLAAIRWHLSLPTFALNK
HHHHHHHHHHHHEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301; 1741267 [H]