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The map label for this gene is 59712728

Identifier: 59712728

GI number: 59712728

Start: 2357232

End: 2357678

Strand: Reverse

Name: 59712728

Synonym: VF_2121

Alternate gene names: NA

Gene position: 2357678-2357232 (Counterclockwise)

Preceding gene: 59712729

Following gene: 59712726

Centisome position: 81.37

GC content: 36.91

Gene sequence:

>447_bases
ATGAAGAAGGTACTATTTGCCGCAACACTAATAACAGCTTTATCTGGTTGTCAAATGACGAATCAATCAGAAGCGGATTG
GAAACAAGATAATAAAATTGAAATGATGAATGCCAAAATTGAATTGAATTCAGCCATTTGGATAGATCAAATGCCAACTA
TTGGTGAAGACAGTGATGAGAGTAAAGTTAACTTTGCATTAGGTTTGAGCTCAAAACAAGTCATAGCACCTGAATTGAAT
ATTGAACGTGTTGAACTACGTCAAGGTGACGACTCTTGGGAAGTAACCGAAGAGGAATATGAAGTACGAGTTCAAGATAA
TCATAATTGGGAAGTGGCAGGCCAGACATTCCACACCTTAGACGCAAGCAAAAAAGTAGATATTGCAATTAAAGCAAGTG
GTGAGTGGATTATTGAAACCAACGTGAGTGTTGATACAGTATATTAA

Upstream 100 bases:

>100_bases
AAAATATTGATGATTGGGTTGAAGAAATCAAAAATGAATACGAACATGATATTCAAATTTTAAAAAGCTGGTTAGAGCAG
CAAGATAAGTAAGGAATAAT

Downstream 100 bases:

>100_bases
TACTATGTTATATAGATAAAAAATGCCCAGCTATCACTAGCTGGGCATTTTATTTAAAGTCAGATAGAAGAGATTCTTAT
AGCTCTTCTAGGTCACCACA

Product: putative lipoprotein

Products: NA

Alternate protein names: DNA Polymerase III Beta Chain

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MKKVLFAATLITALSGCQMTNQSEADWKQDNKIEMMNAKIELNSAIWIDQMPTIGEDSDESKVNFALGLSSKQVIAPELN
IERVELRQGDDSWEVTEEEYEVRVQDNHNWEVAGQTFHTLDASKKVDIAIKASGEWIIETNVSVDTVY

Sequences:

>Translated_148_residues
MKKVLFAATLITALSGCQMTNQSEADWKQDNKIEMMNAKIELNSAIWIDQMPTIGEDSDESKVNFALGLSSKQVIAPELN
IERVELRQGDDSWEVTEEEYEVRVQDNHNWEVAGQTFHTLDASKKVDIAIKASGEWIIETNVSVDTVY
>Mature_148_residues
MKKVLFAATLITALSGCQMTNQSEADWKQDNKIEMMNAKIELNSAIWIDQMPTIGEDSDESKVNFALGLSSKQVIAPELN
IERVELRQGDDSWEVTEEEYEVRVQDNHNWEVAGQTFHTLDASKKVDIAIKASGEWIIETNVSVDTVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16708; Mature: 16708

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVLFAATLITALSGCQMTNQSEADWKQDNKIEMMNAKIELNSAIWIDQMPTIGEDSDE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCC
SKVNFALGLSSKQVIAPELNIERVELRQGDDSWEVTEEEYEVRVQDNHNWEVAGQTFHTL
CEEEEEEECCCCEEECCCCCEEEEEEECCCCCCEEECCEEEEEEECCCCEEECCCEEEEC
DASKKVDIAIKASGEWIIETNVSVDTVY
CCCCEEEEEEECCCCEEEECCCEEEEEC
>Mature Secondary Structure
MKKVLFAATLITALSGCQMTNQSEADWKQDNKIEMMNAKIELNSAIWIDQMPTIGEDSDE
CCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEEEEECCCCCCCCCCC
SKVNFALGLSSKQVIAPELNIERVELRQGDDSWEVTEEEYEVRVQDNHNWEVAGQTFHTL
CEEEEEEECCCCEEECCCCCEEEEEEECCCCCCEEECCEEEEEEECCCCEEECCCEEEEC
DASKKVDIAIKASGEWIIETNVSVDTVY
CCCCEEEEEEECCCCEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA