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The map label for this gene is ybaK [C]

Identifier: 59712705

GI number: 59712705

Start: 2334372

End: 2334854

Strand: Direct

Name: ybaK [C]

Synonym: VF_2098

Alternate gene names: 59712705

Gene position: 2334372-2334854 (Clockwise)

Preceding gene: 59712704

Following gene: 59712706

Centisome position: 80.56

GC content: 40.37

Gene sequence:

>483_bases
ATGATGAGTAAGTTGCAAACATCTGTGACGGATCTGCTTGATAAAGAGCAGATCCCTTACCGACTACTTCCACATAAAAC
TCCCGCAATCAGTGTTCAAGATGCAGCTGAACAGCGTGGAGTCTCTCCATCTCAGATGGTTAAAACAATTGTTTTACGAG
ATATGGGTGGACGATTGGCTCTAGCTTGCGTTCCTGGAGATCAACAAGTAGATCCAAAAAAAGTACGACAATTATTAGAT
TGCCGACGCATGACCTGTGTTTCATCTGATGAAGTAAAGCTAATTACAGGCTTTGAGATTGGTACGATAAACCCAATAGT
AACAGCGACACCAATGCCTGTTTTTCTAGATATTCATTTCCAACAACATCAATATATTAATATATCTAGCGGCGATAGAA
TGGCAGGAATTGAATTAACACTCGCTGACTTGTGTCATTTATGCCAACCAACTCTAGCTTCTTTGTGCCGAGAATTGGAT
TAA

Upstream 100 bases:

>100_bases
ACTCTTGCTCTAGCAATCCTTCCAAATGATTTAGATGAAGATACACAATTCAAACTTCAAGAATCTATCTGGGAAAAAGT
AGAATTACCTTACTCACTTA

Downstream 100 bases:

>100_bases
TTTACATTCTTACATAACAAACTTGATCCATTACTCATTTCACCACATCAAAAGATGAATTATTATTTATTTTTTATGAA
TAAGTAGCATTTTGGTTAAT

Product: regulatory protein

Products: NA

Alternate protein names: YbaK/EbsC Protein; Regulatory Protein; YbaK / Prolyl-TRNA Synthetases Associated Domain; YbaK Domain-Containing Protein

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MMSKLQTSVTDLLDKEQIPYRLLPHKTPAISVQDAAEQRGVSPSQMVKTIVLRDMGGRLALACVPGDQQVDPKKVRQLLD
CRRMTCVSSDEVKLITGFEIGTINPIVTATPMPVFLDIHFQQHQYINISSGDRMAGIELTLADLCHLCQPTLASLCRELD

Sequences:

>Translated_160_residues
MMSKLQTSVTDLLDKEQIPYRLLPHKTPAISVQDAAEQRGVSPSQMVKTIVLRDMGGRLALACVPGDQQVDPKKVRQLLD
CRRMTCVSSDEVKLITGFEIGTINPIVTATPMPVFLDIHFQQHQYINISSGDRMAGIELTLADLCHLCQPTLASLCRELD
>Mature_160_residues
MMSKLQTSVTDLLDKEQIPYRLLPHKTPAISVQDAAEQRGVSPSQMVKTIVLRDMGGRLALACVPGDQQVDPKKVRQLLD
CRRMTCVSSDEVKLITGFEIGTINPIVTATPMPVFLDIHFQQHQYINISSGDRMAGIELTLADLCHLCQPTLASLCRELD

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=156, Percent_Identity=26.9230769230769, Blast_Score=60, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17731; Mature: 17731

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKLQTSVTDLLDKEQIPYRLLPHKTPAISVQDAAEQRGVSPSQMVKTIVLRDMGGRLA
CCCHHHHHHHHHHHHCCCCEEECCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
LACVPGDQQVDPKKVRQLLDCRRMTCVSSDEVKLITGFEIGTINPIVTATPMPVFLDIHF
EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEEEEEE
QQHQYINISSGDRMAGIELTLADLCHLCQPTLASLCRELD
CCCEEEEECCCCEEECCEEEHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure
MMSKLQTSVTDLLDKEQIPYRLLPHKTPAISVQDAAEQRGVSPSQMVKTIVLRDMGGRLA
CCCHHHHHHHHHHHHCCCCEEECCCCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
LACVPGDQQVDPKKVRQLLDCRRMTCVSSDEVKLITGFEIGTINPIVTATPMPVFLDIHF
EEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEECCCCEEEEEEEE
QQHQYINISSGDRMAGIELTLADLCHLCQPTLASLCRELD
CCCEEEEECCCCEEECCEEEHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA