| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712661
Identifier: 59712661
GI number: 59712661
Start: 2285574
End: 2286647
Strand: Direct
Name: 59712661
Synonym: VF_2054
Alternate gene names: NA
Gene position: 2285574-2286647 (Clockwise)
Preceding gene: 59712660
Following gene: 59712666
Centisome position: 78.88
GC content: 38.18
Gene sequence:
>1074_bases ATGAATAAAAATGCGTTTGTAATTGGAACACTGCTGACTTGTTCAGCAGTGTTTTACCATTGGATAATCCAAGAAACGAC ACCGACCCCAGCGAAAGCTTCTCCTTTATCTAAAACGGAGAGTAAATCTGTGTCGACAAACACCTTGCAGCCAAAACCAC TCCACCAAAAGCAAGAGAGCCGCACAATAAAATCAATAACACCTGAACCTATCGATTCAGAATCAACACCAGAAGAAGTG AGTCAACAGTTCGCATTATTATCCCAAATATACGAACAAGAACTTCAATACCCTAGCTACTCTTTACCATTAACACCTAA TAGCTATAGCTACCTTGAACCCAATCACTTCACTGAAATTGCTTTGCCTGTATTAGATGGAAGCCACTCAGCCTCACTAG GATTAAGTAAATATCGTTTTAGTTACCCTGAACCTATTAGAGTGACCTTAAATTCTGATCTTAATGTTGACCATATTGAA TACCAACTGATTGATATTGAAACTCAAAAGACGCTTGCTAGCCTATATACTCAAGAGCTAAGCTTTGAATTTTCACCTAA ACAAGATTGGCCACAAGAAGTTCGTATAAAAGCAAATATCTCTTTTGACCAAGGTGATGACGTATTAACTGCAGATTTTC AGTTCTCTAACCCAATAGCCTTTGTTAACCAAGTATCAGCCCCTTACTCACAAGGCAGCGATATGATCATTCCTTTACAA GTTGATGTGAAAGAATCTGGTTTGTACCGAATTCGAGCTAACTTATATCAAAGTAATGGGAAACCAGTCGCTTCTCTTAT GAATAAAATGCCTCTTACAACGGGTGAAGTGACATTTGAACTAAAAGCGCACCATTCTGTATTAAAAGAGAAAGGAAGTG ATTTTGAGTTACGCAGCATTACCGTAGAAAAAATGTCAGGGTTTCCTGATGAGAAAACACATTACGGTATAAGTAAAGAG CAGAGCTACCCTCTCTCTTCTTTTGACGTATCTAGCTTAAATAATCAGCCTTATAAAATGTCAGAAGAAGAAAAGGAACG ATTGGATTTTCTCGATGAGATCGCCCACCAATAA
Upstream 100 bases:
>100_bases AAACCACAGATTCTGCATACTGGTTAACAGGAAATGTCTATCGTTACGTCAATAATTCAGAAAACGCCACCATGTCAGAA TTAGTCAGTGAGCTACTATA
Downstream 100 bases:
>100_bases AAAAGGAGATCGTACGATCTCCTTTTATCATTTAATGAATCCCGAATTAATTCAGCATTTCACCTTTGTACTCACCAGTT AAGGTTTTCAAATAAGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNKNAFVIGTLLTCSAVFYHWIIQETTPTPAKASPLSKTESKSVSTNTLQPKPLHQKQESRTIKSITPEPIDSESTPEEV SQQFALLSQIYEQELQYPSYSLPLTPNSYSYLEPNHFTEIALPVLDGSHSASLGLSKYRFSYPEPIRVTLNSDLNVDHIE YQLIDIETQKTLASLYTQELSFEFSPKQDWPQEVRIKANISFDQGDDVLTADFQFSNPIAFVNQVSAPYSQGSDMIIPLQ VDVKESGLYRIRANLYQSNGKPVASLMNKMPLTTGEVTFELKAHHSVLKEKGSDFELRSITVEKMSGFPDEKTHYGISKE QSYPLSSFDVSSLNNQPYKMSEEEKERLDFLDEIAHQ
Sequences:
>Translated_357_residues MNKNAFVIGTLLTCSAVFYHWIIQETTPTPAKASPLSKTESKSVSTNTLQPKPLHQKQESRTIKSITPEPIDSESTPEEV SQQFALLSQIYEQELQYPSYSLPLTPNSYSYLEPNHFTEIALPVLDGSHSASLGLSKYRFSYPEPIRVTLNSDLNVDHIE YQLIDIETQKTLASLYTQELSFEFSPKQDWPQEVRIKANISFDQGDDVLTADFQFSNPIAFVNQVSAPYSQGSDMIIPLQ VDVKESGLYRIRANLYQSNGKPVASLMNKMPLTTGEVTFELKAHHSVLKEKGSDFELRSITVEKMSGFPDEKTHYGISKE QSYPLSSFDVSSLNNQPYKMSEEEKERLDFLDEIAHQ >Mature_357_residues MNKNAFVIGTLLTCSAVFYHWIIQETTPTPAKASPLSKTESKSVSTNTLQPKPLHQKQESRTIKSITPEPIDSESTPEEV SQQFALLSQIYEQELQYPSYSLPLTPNSYSYLEPNHFTEIALPVLDGSHSASLGLSKYRFSYPEPIRVTLNSDLNVDHIE YQLIDIETQKTLASLYTQELSFEFSPKQDWPQEVRIKANISFDQGDDVLTADFQFSNPIAFVNQVSAPYSQGSDMIIPLQ VDVKESGLYRIRANLYQSNGKPVASLMNKMPLTTGEVTFELKAHHSVLKEKGSDFELRSITVEKMSGFPDEKTHYGISKE QSYPLSSFDVSSLNNQPYKMSEEEKERLDFLDEIAHQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40397; Mature: 40397
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKNAFVIGTLLTCSAVFYHWIIQETTPTPAKASPLSKTESKSVSTNTLQPKPLHQKQES CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RTIKSITPEPIDSESTPEEVSQQFALLSQIYEQELQYPSYSLPLTPNSYSYLEPNHFTEI CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE ALPVLDGSHSASLGLSKYRFSYPEPIRVTLNSDLNVDHIEYQLIDIETQKTLASLYTQEL EEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHH SFEFSPKQDWPQEVRIKANISFDQGDDVLTADFQFSNPIAFVNQVSAPYSQGSDMIIPLQ CEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEE VDVKESGLYRIRANLYQSNGKPVASLMNKMPLTTGEVTFELKAHHSVLKEKGSDFELRSI EECCCCCEEEEEEEHHHCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCEEEEEE TVEKMSGFPDEKTHYGISKEQSYPLSSFDVSSLNNQPYKMSEEEKERLDFLDEIAHQ EHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKNAFVIGTLLTCSAVFYHWIIQETTPTPAKASPLSKTESKSVSTNTLQPKPLHQKQES CCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH RTIKSITPEPIDSESTPEEVSQQFALLSQIYEQELQYPSYSLPLTPNSYSYLEPNHFTEI CHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE ALPVLDGSHSASLGLSKYRFSYPEPIRVTLNSDLNVDHIEYQLIDIETQKTLASLYTQEL EEEEECCCCCCCCCCHHHCCCCCCCEEEEECCCCCEEEEEEEEEEECHHHHHHHHHHHHH SFEFSPKQDWPQEVRIKANISFDQGDDVLTADFQFSNPIAFVNQVSAPYSQGSDMIIPLQ CEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCHHHHHHCCCCCCCCCCEEEEEE VDVKESGLYRIRANLYQSNGKPVASLMNKMPLTTGEVTFELKAHHSVLKEKGSDFELRSI EECCCCCEEEEEEEHHHCCCCCHHHHHHHCCCCCCCEEEEEHHHHHHHHHCCCCEEEEEE TVEKMSGFPDEKTHYGISKEQSYPLSSFDVSSLNNQPYKMSEEEKERLDFLDEIAHQ EHHHHCCCCCCHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA