| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712628
Identifier: 59712628
GI number: 59712628
Start: 2253433
End: 2253675
Strand: Reverse
Name: 59712628
Synonym: VF_2021
Alternate gene names: NA
Gene position: 2253675-2253433 (Counterclockwise)
Preceding gene: 172087742
Following gene: 59712627
Centisome position: 77.78
GC content: 41.98
Gene sequence:
>243_bases TTGCTTGTGGGCATTGCGGGCGATGATTCGGGGACCGTCTTTGATGATGAAGATAAACCGAATTTTATTTATGTGTCATT AAGTCCTGATGTTCGCAGCGAAGAAGCCTGGTTTGAGTTTGAAAAAGTGCGCTTGCCACACACATCTATTGAATGGCTTT ACAACGCAACAATTAACGTACAAACGCAAATAGCCAATGCTCGGCATATTCGCAATGTTCATAAATACGAGGTAACTCAA TGA
Upstream 100 bases:
>100_bases TGGCTGCAGATTTCAAGCTGACAAATGATGAAATTCAACTGTCGTTGTTAACGGATTTTTCGGCAAAGTTGTTCGGCTGG AATTAAGTGATTATCAAGCG
Downstream 100 bases:
>100_bases GTTTATTAATTACCGATGCTGGCATTGCAGCCGCAACCGCTGCAGGTGATTTGGGTGTCAGTTATAAAATTGCTTATATT AGTGTTGGCACTGAGGGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 80
Protein sequence:
>80_residues MLVGIAGDDSGTVFDDEDKPNFIYVSLSPDVRSEEAWFEFEKVRLPHTSIEWLYNATINVQTQIANARHIRNVHKYEVTQ
Sequences:
>Translated_80_residues MLVGIAGDDSGTVFDDEDKPNFIYVSLSPDVRSEEAWFEFEKVRLPHTSIEWLYNATINVQTQIANARHIRNVHKYEVTQ >Mature_80_residues MLVGIAGDDSGTVFDDEDKPNFIYVSLSPDVRSEEAWFEFEKVRLPHTSIEWLYNATINVQTQIANARHIRNVHKYEVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9253; Mature: 9253
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGIAGDDSGTVFDDEDKPNFIYVSLSPDVRSEEAWFEFEKVRLPHTSIEWLYNATINV CEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECEEEE QTQIANARHIRNVHKYEVTQ EEEECCCHHCCCCCEEEECC >Mature Secondary Structure MLVGIAGDDSGTVFDDEDKPNFIYVSLSPDVRSEEAWFEFEKVRLPHTSIEWLYNATINV CEEEECCCCCCCEECCCCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCEEEEEECEEEE QTQIANARHIRNVHKYEVTQ EEEECCCHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA