| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712612
Identifier: 59712612
GI number: 59712612
Start: 2241156
End: 2241425
Strand: Reverse
Name: 59712612
Synonym: VF_2005
Alternate gene names: NA
Gene position: 2241425-2241156 (Counterclockwise)
Preceding gene: 59712613
Following gene: 59712611
Centisome position: 77.36
GC content: 39.26
Gene sequence:
>270_bases ATGAGTAATAAAATGTTCAAAGTAAAACTGGCAACACCGATGGAAGTGGATGGTAAAGAAGTATCAGAGTTAGAGCTTCG CAAACCGACAGCTGGTGATCTGCGTGGTTTGAATTTAGTCCAGGTATGTGAAATGCATTTTGATGCGGTATATATCTTAC TTCCTCGTATCTCCGAATTAAATGAGCGAGATATTTTGAATATGGAGACTGAAAACTTCGCCCCATTAATGACGGAAATA GCCTCTTTTTTCGTGGATATGAAGCGCTAA
Upstream 100 bases:
>100_bases AACGAAGAAGCATTGGCATTGTATGAAGTCGTGATGGCCATTGATCCAAATAAAGGCGGACGTAAAATCCGAGTAAAAGA ATTAAAAGAGGCGTTAGGGC
Downstream 100 bases:
>100_bases TTGAGCGGGTTGAAACGTATTACGCCGACCTAGCAGTGGTGTTTCATTGGCAGCCAAGTGAAATAGATAAACTCAGCTTA AGCGATTTAATTTTATTTCG
Product: putative phage tail protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MSNKMFKVKLATPMEVDGKEVSELELRKPTAGDLRGLNLVQVCEMHFDAVYILLPRISELNERDILNMETENFAPLMTEI ASFFVDMKR
Sequences:
>Translated_89_residues MSNKMFKVKLATPMEVDGKEVSELELRKPTAGDLRGLNLVQVCEMHFDAVYILLPRISELNERDILNMETENFAPLMTEI ASFFVDMKR >Mature_88_residues SNKMFKVKLATPMEVDGKEVSELELRKPTAGDLRGLNLVQVCEMHFDAVYILLPRISELNERDILNMETENFAPLMTEIA SFFVDMKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10250; Mature: 10119
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 7.9 %Met (Translated Protein) 9.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKMFKVKLATPMEVDGKEVSELELRKPTAGDLRGLNLVQVCEMHFDAVYILLPRISEL CCCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC NERDILNMETENFAPLMTEIASFFVDMKR CCCCCCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SNKMFKVKLATPMEVDGKEVSELELRKPTAGDLRGLNLVQVCEMHFDAVYILLPRISEL CCCEEEEEECCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCC NERDILNMETENFAPLMTEIASFFVDMKR CCCCCCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA