Click here to switch to the map view.

The map label for this gene is yaeT [H]

Identifier: 59712561

GI number: 59712561

Start: 2182671

End: 2185100

Strand: Reverse

Name: yaeT [H]

Synonym: VF_1954

Alternate gene names: 59712561

Gene position: 2185100-2182671 (Counterclockwise)

Preceding gene: 59712562

Following gene: 59712560

Centisome position: 75.41

GC content: 39.38

Gene sequence:

>2430_bases
ATGGCGATGAAAAAATTGTTGATTGCCTCACTGCTGTTTGGCAGTGTTGCAGCGCACAGTGCAGAAACATTTGTTATTGA
TGACATACGCTTTGAGGGATTACAGCGTGTTGCATTAGGTGCTGCACTACTTAAAACACCAGTTCGTGTTGGTGATACGA
TGAGCCAACAAGATGTAGCTCAGGTTATTCAGGCTCTTTTCGCATCTGGCAACTTTGAAGACGTAAAAGTGTTTCGTGAT
GGTAATGCATTACTTATCAAGGTAACTGAACGCCCAACGATCGCAAATATCTCATTCTCTGGTAATAAAGCGATCAAAGA
AGAGCAGATGCAGCAAAATCTAGAAGCTTCTTCTATTCGAGTTGGTGAAGCGTTAGATAGAACAACTTTAAGTAATATTG
AAAAAGGGCTAGAAGACTTCTATTACAGCGTAGGTAAATACAACGCGACTGTTCATGCAGTTGTAACGCCACTTCCTCGT
AATCGTGCAGATCTTAAATTCGTGTTCACCGAAGGTGTATCGGCAAAGATCCAACAAATTAACTTTATTGGAAATGAAGT
TTTTACCGATGAGCAACTATTAAGCCGTTTTAACTTAAATGTTGATGTTGCTTGGTGGAACTTCTTAGCTGATGAAAAGT
ATCAAAAACAAGTACTTGCTGGTGATATCGAAGCATTACGTTCATATTATCTTGATCGCGGTTATTTAAAATTTCAAGTT
GACTCAACCCAAGTGTCTATTTCACCTGACAAAAAAGGTGTGTATATCGCTTTAACGATTGATGAAGGCGAACCTTACAC
TGTTAGTGGTGTTAAATTCCAAGGTGAATTAATTGGGAAAGAAGAAGAGTTTAAAAAACTGATACCGTTTGAAAATGGTG
AAGTTTACAACGGCTCTGCGGTAACGAGTTTAGAAGAAAACATAAAGCGTATTTTAGGTGAAGCGGGTTACGCTTATCCT
CAAGTTCGTACCATGCCTGAATTTGATGATGAAAACCAAACTGTATCATTAATCATCAATGTCGAAGCTGGTAATCGTAT
GTACGTTCGTGATATTCGATTTGTTGGTAATACATCGACAAAAGATGAAGTATTACGTCGTGAAATGCGTCAAATGGAAG
GGGCTTGGTTAAACTCTAAGTCAATTGAGACAGGTAAAAATCGTCTCAATCGTTTGGGCTTCTTTGAAACTGTTGATGTG
CAAACCGTTCGTGTTCCTGGTTCTGATGATGAAGTTGATCTGGTTTATTCTGTAAAAGAAGCGAACTCCGGTAGTGTTAA
CTTTGGTGTTGGCTATGGTACGGAATCGGGTATCAGTTTCCAAGTAGGCTTACAACAAGATAACTTTATTGGTTCAGGTA
ATCGTGTTGGTATCAATGCCATGATGAACGATTATCAAAAGAACATCAGTTTAGACTATCGTGATCCATACTGGAACCTT
GATGGTGTCAGTCTCGGTGGTAAGATCTTCTATAATGAGTTTGAAGCATCAGACGCAGGTATTGTTGACTACACCAACCA
AAGTTATGGTGGTAGTTTAACTTGGGGTTTCCCATTTGATGAATTGAACTATTTTGAAATTGGTGTGGGTTACACTCACA
ATAAAATTTCAAACTTAGAAGGTTATGTACAGATTGAACAGTATCTACAATCTGTAGGCGATGCATATGATAGTGGTGAT
CAAACCTTAATCGTTAGTGATTTTGATGTCACCTTATCGTGGACACGTAATAACTTGAATAAAGGGTATTTCCCAACTGC
GGGTAACTACCAACGTGCATCGTATAAAATCACAACGCCAAATTCTGATTCACAGTTCTTTAAAGCGCAATATGAAGTTC
GACAGTACTTCCCATTAACTAAGAAGCATGAGTTTGCTTTATTAATGCGTGGTAAGGCTGGTTACGGTAATGGTTATGGT
CAAACCGACGGTAATGATAACCTGTATCCATTCTATGAAAACTTCTATGCGGGTGGCTTCACTACGCTACGTGGTTTTGG
TTCAAACTCTGGTGGTCCAAAAGCAGTGTATGCGCAAGGATCAAATGGTGGTATAGGTAACAACACTTCTTATGCGGCAA
CAGATGACTCTGTTGGTGGTAACGCAACAGCCTTAGCAAGTATTGAATTAATCGTTCCAACACCGTTTGCAAGTGAAGAG
ACTCGAAATCAAATTCGAACCAGCGTTTTCTTTGATATGGCAAGTGTTTGGGATACTGAATTTGATTATAAAGAACCTAA
GCCGGGAATGGATGGCGCTCAGTACTACTATGATTACTCTGATCCATCAAACTTCCGTTCATCATATGGTGCCGCTGTGC
AGTGGATGTCACCAATGGGACCATTAGTATTCTCAATTGCGAAACCAGTGAAAATTTATGAAGGTGATGATGAAGAATTC
TTCAGTTTCACCATTGGTCGAACTTTCTAA

Upstream 100 bases:

>100_bases
ATAAAGTAGGAACAGCAATGATCATGTCATTGATGGCGATAGCTTTATTTAACGACTTTATGCGCCTTTAAGTAGTAGCA
AGGGAATTATTAGACGTATT

Downstream 100 bases:

>100_bases
GCATTGATAGCTCTAATAGAAAAGTGTTAATGTAAACTGTATTGGTTTATATACGATAATAGTTAAGTAAGGATATGATT
TTGAAAAAATTAGTGAAAGT

Product: outer membrane protein assembly factor YaeT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 809; Mature: 808

Protein sequence:

>809_residues
MAMKKLLIASLLFGSVAAHSAETFVIDDIRFEGLQRVALGAALLKTPVRVGDTMSQQDVAQVIQALFASGNFEDVKVFRD
GNALLIKVTERPTIANISFSGNKAIKEEQMQQNLEASSIRVGEALDRTTLSNIEKGLEDFYYSVGKYNATVHAVVTPLPR
NRADLKFVFTEGVSAKIQQINFIGNEVFTDEQLLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALRSYYLDRGYLKFQV
DSTQVSISPDKKGVYIALTIDEGEPYTVSGVKFQGELIGKEEEFKKLIPFENGEVYNGSAVTSLEENIKRILGEAGYAYP
QVRTMPEFDDENQTVSLIINVEAGNRMYVRDIRFVGNTSTKDEVLRREMRQMEGAWLNSKSIETGKNRLNRLGFFETVDV
QTVRVPGSDDEVDLVYSVKEANSGSVNFGVGYGTESGISFQVGLQQDNFIGSGNRVGINAMMNDYQKNISLDYRDPYWNL
DGVSLGGKIFYNEFEASDAGIVDYTNQSYGGSLTWGFPFDELNYFEIGVGYTHNKISNLEGYVQIEQYLQSVGDAYDSGD
QTLIVSDFDVTLSWTRNNLNKGYFPTAGNYQRASYKITTPNSDSQFFKAQYEVRQYFPLTKKHEFALLMRGKAGYGNGYG
QTDGNDNLYPFYENFYAGGFTTLRGFGSNSGGPKAVYAQGSNGGIGNNTSYAATDDSVGGNATALASIELIVPTPFASEE
TRNQIRTSVFFDMASVWDTEFDYKEPKPGMDGAQYYYDYSDPSNFRSSYGAAVQWMSPMGPLVFSIAKPVKIYEGDDEEF
FSFTIGRTF

Sequences:

>Translated_809_residues
MAMKKLLIASLLFGSVAAHSAETFVIDDIRFEGLQRVALGAALLKTPVRVGDTMSQQDVAQVIQALFASGNFEDVKVFRD
GNALLIKVTERPTIANISFSGNKAIKEEQMQQNLEASSIRVGEALDRTTLSNIEKGLEDFYYSVGKYNATVHAVVTPLPR
NRADLKFVFTEGVSAKIQQINFIGNEVFTDEQLLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALRSYYLDRGYLKFQV
DSTQVSISPDKKGVYIALTIDEGEPYTVSGVKFQGELIGKEEEFKKLIPFENGEVYNGSAVTSLEENIKRILGEAGYAYP
QVRTMPEFDDENQTVSLIINVEAGNRMYVRDIRFVGNTSTKDEVLRREMRQMEGAWLNSKSIETGKNRLNRLGFFETVDV
QTVRVPGSDDEVDLVYSVKEANSGSVNFGVGYGTESGISFQVGLQQDNFIGSGNRVGINAMMNDYQKNISLDYRDPYWNL
DGVSLGGKIFYNEFEASDAGIVDYTNQSYGGSLTWGFPFDELNYFEIGVGYTHNKISNLEGYVQIEQYLQSVGDAYDSGD
QTLIVSDFDVTLSWTRNNLNKGYFPTAGNYQRASYKITTPNSDSQFFKAQYEVRQYFPLTKKHEFALLMRGKAGYGNGYG
QTDGNDNLYPFYENFYAGGFTTLRGFGSNSGGPKAVYAQGSNGGIGNNTSYAATDDSVGGNATALASIELIVPTPFASEE
TRNQIRTSVFFDMASVWDTEFDYKEPKPGMDGAQYYYDYSDPSNFRSSYGAAVQWMSPMGPLVFSIAKPVKIYEGDDEEF
FSFTIGRTF
>Mature_808_residues
AMKKLLIASLLFGSVAAHSAETFVIDDIRFEGLQRVALGAALLKTPVRVGDTMSQQDVAQVIQALFASGNFEDVKVFRDG
NALLIKVTERPTIANISFSGNKAIKEEQMQQNLEASSIRVGEALDRTTLSNIEKGLEDFYYSVGKYNATVHAVVTPLPRN
RADLKFVFTEGVSAKIQQINFIGNEVFTDEQLLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALRSYYLDRGYLKFQVD
STQVSISPDKKGVYIALTIDEGEPYTVSGVKFQGELIGKEEEFKKLIPFENGEVYNGSAVTSLEENIKRILGEAGYAYPQ
VRTMPEFDDENQTVSLIINVEAGNRMYVRDIRFVGNTSTKDEVLRREMRQMEGAWLNSKSIETGKNRLNRLGFFETVDVQ
TVRVPGSDDEVDLVYSVKEANSGSVNFGVGYGTESGISFQVGLQQDNFIGSGNRVGINAMMNDYQKNISLDYRDPYWNLD
GVSLGGKIFYNEFEASDAGIVDYTNQSYGGSLTWGFPFDELNYFEIGVGYTHNKISNLEGYVQIEQYLQSVGDAYDSGDQ
TLIVSDFDVTLSWTRNNLNKGYFPTAGNYQRASYKITTPNSDSQFFKAQYEVRQYFPLTKKHEFALLMRGKAGYGNGYGQ
TDGNDNLYPFYENFYAGGFTTLRGFGSNSGGPKAVYAQGSNGGIGNNTSYAATDDSVGGNATALASIELIVPTPFASEET
RNQIRTSVFFDMASVWDTEFDYKEPKPGMDGAQYYYDYSDPSNFRSSYGAAVQWMSPMGPLVFSIAKPVKIYEGDDEEFF
SFTIGRTF

Specific function: Involved in the assembly of outer membrane proteins. Does not play a direct role in the export of outer membrane lipids [H]

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=824, Percent_Identity=56.4320388349515, Blast_Score=951, Evalue=0.0,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 90193; Mature: 90062

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMKKLLIASLLFGSVAAHSAETFVIDDIRFEGLQRVALGAALLKTPVRVGDTMSQQDVA
CCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHH
QVIQALFASGNFEDVKVFRDGNALLIKVTERPTIANISFSGNKAIKEEQMQQNLEASSIR
HHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHHHCCCCHHHEE
VGEALDRTTLSNIEKGLEDFYYSVGKYNATVHAVVTPLPRNRADLKFVFTEGVSAKIQQI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEE
NFIGNEVFTDEQLLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALRSYYLDRGYLKFQV
EECCCHHCCHHHHHHHHCCCEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DSTQVSISPDKKGVYIALTIDEGEPYTVSGVKFQGELIGKEEEFKKLIPFENGEVYNGSA
ECEEEEECCCCCCEEEEEEECCCCCEEEECEEEEEEECCCHHHHHHHCCCCCCCEECCCC
VTSLEENIKRILGEAGYAYPQVRTMPEFDDENQTVSLIINVEAGNRMYVRDIRFVGNTST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCC
KDEVLRREMRQMEGAWLNSKSIETGKNRLNRLGFFETVDVQTVRVPGSDDEVDLVYSVKE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECEEEEECCCCCCCEEEEEEEEC
ANSGSVNFGVGYGTESGISFQVGLQQDNFIGSGNRVGINAMMNDYQKNISLDYRDPYWNL
CCCCCEEEEEECCCCCCEEEEEECCCCCEECCCCEEEHHHHHHHHHHCCEEEECCCCCCC
DGVSLGGKIFYNEFEASDAGIVDYTNQSYGGSLTWGFPFDELNYFEIGVGYTHNKISNLE
CCEECCCEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCEEEEECCCCCCHHCCCC
GYVQIEQYLQSVGDAYDSGDQTLIVSDFDVTLSWTRNNLNKGYFPTAGNYQRASYKITTP
HHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
NSDSQFFKAQYEVRQYFPLTKKHEFALLMRGKAGYGNGYGQTDGNDNLYPFYENFYAGGF
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
TTLRGFGSNSGGPKAVYAQGSNGGIGNNTSYAATDDSVGGNATALASIELIVPTPFASEE
CEEEECCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCHH
TRNQIRTSVFFDMASVWDTEFDYKEPKPGMDGAQYYYDYSDPSNFRSSYGAAVQWMSPMG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCCC
PLVFSIAKPVKIYEGDDEEFFSFTIGRTF
HHHHHHCCCEEEEECCCCCEEEEEECCCC
>Mature Secondary Structure 
AMKKLLIASLLFGSVAAHSAETFVIDDIRFEGLQRVALGAALLKTPVRVGDTMSQQDVA
CHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHH
QVIQALFASGNFEDVKVFRDGNALLIKVTERPTIANISFSGNKAIKEEQMQQNLEASSIR
HHHHHHHHCCCCCEEEEEECCCEEEEEEECCCEEEEEEECCCCHHHHHHHHCCCCHHHEE
VGEALDRTTLSNIEKGLEDFYYSVGKYNATVHAVVTPLPRNRADLKFVFTEGVSAKIQQI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCEEEEEECCCCCEEEEE
NFIGNEVFTDEQLLSRFNLNVDVAWWNFLADEKYQKQVLAGDIEALRSYYLDRGYLKFQV
EECCCHHCCHHHHHHHHCCCEEEEEEEHHHCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
DSTQVSISPDKKGVYIALTIDEGEPYTVSGVKFQGELIGKEEEFKKLIPFENGEVYNGSA
ECEEEEECCCCCCEEEEEEECCCCCEEEECEEEEEEECCCHHHHHHHCCCCCCCEECCCC
VTSLEENIKRILGEAGYAYPQVRTMPEFDDENQTVSLIINVEAGNRMYVRDIRFVGNTST
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEEEEEEECCCCC
KDEVLRREMRQMEGAWLNSKSIETGKNRLNRLGFFETVDVQTVRVPGSDDEVDLVYSVKE
HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECEEEEECCCCCCCEEEEEEEEC
ANSGSVNFGVGYGTESGISFQVGLQQDNFIGSGNRVGINAMMNDYQKNISLDYRDPYWNL
CCCCCEEEEEECCCCCCEEEEEECCCCCEECCCCEEEHHHHHHHHHHCCEEEECCCCCCC
DGVSLGGKIFYNEFEASDAGIVDYTNQSYGGSLTWGFPFDELNYFEIGVGYTHNKISNLE
CCEECCCEEEEEEECCCCCCEEEECCCCCCCEEEECCCCCCCCEEEEECCCCCCHHCCCC
GYVQIEQYLQSVGDAYDSGDQTLIVSDFDVTLSWTRNNLNKGYFPTAGNYQRASYKITTP
HHHHHHHHHHHHHHHCCCCCCEEEEEECEEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
NSDSQFFKAQYEVRQYFPLTKKHEFALLMRGKAGYGNGYGQTDGNDNLYPFYENFYAGGF
CCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCC
TTLRGFGSNSGGPKAVYAQGSNGGIGNNTSYAATDDSVGGNATALASIELIVPTPFASEE
CEEEECCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEEEEEEECCCCCCHH
TRNQIRTSVFFDMASVWDTEFDYKEPKPGMDGAQYYYDYSDPSNFRSSYGAAVQWMSPMG
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHCCEEEECCCCC
PLVFSIAKPVKIYEGDDEEFFSFTIGRTF
HHHHHHCCCEEEEECCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA