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The map label for this gene is 59712550

Identifier: 59712550

GI number: 59712550

Start: 2171540

End: 2171851

Strand: Reverse

Name: 59712550

Synonym: VF_1943

Alternate gene names: NA

Gene position: 2171851-2171540 (Counterclockwise)

Preceding gene: 172087739

Following gene: 59712549

Centisome position: 74.96

GC content: 40.06

Gene sequence:

>312_bases
ATGAAAAAAATAATTGGATTAGCGGTTATCGCATTAATGGCCTCAGCACCGGCATTGGCAGCGGGTGATGCTGCAGCAGG
AAAAGCAAAATCGGCAATTTGTGCATCATGTCATGGAGCTGATGGAATTGCAGTTATTCCGGGTTATCCAAATCTGAAAG
GTCAGAATGCTCAATATATCGTATCGTCATTAAAAGCATACAAAAATAAAGAGCGAAGTGGTGGTAACTCAGCCATTATG
CAACCAATGTCTATGATGCTAAGTGATACTGATATGGAAAACTTAGCTGCGTATTACTCAACGATGAAATAA

Upstream 100 bases:

>100_bases
TTCAGGGCAAGAATGTGAGCTACTTTGGCATAAACCTGTATCAGAATAGACATTCAAAACGAGCTTGGCACAATAACTTA
AAATTATAAGGAGCAATGGA

Downstream 100 bases:

>100_bases
TAGTAATTTCATTAACGGTATTATTTTAAAACAAAATCATAAATTAAAGCACTGCTGGTATGCGGTGCTTTTTTATTATT
GAATGTTTGTAGTCACTCAA

Product: cytochrome c-554(548)

Products: NA

Alternate protein names: Cytochrome c554 [H]

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKKIIGLAVIALMASAPALAAGDAAAGKAKSAICASCHGADGIAVIPGYPNLKGQNAQYIVSSLKAYKNKERSGGNSAIM
QPMSMMLSDTDMENLAAYYSTMK

Sequences:

>Translated_103_residues
MKKIIGLAVIALMASAPALAAGDAAAGKAKSAICASCHGADGIAVIPGYPNLKGQNAQYIVSSLKAYKNKERSGGNSAIM
QPMSMMLSDTDMENLAAYYSTMK
>Mature_103_residues
MKKIIGLAVIALMASAPALAAGDAAAGKAKSAICASCHGADGIAVIPGYPNLKGQNAQYIVSSLKAYKNKERSGGNSAIM
QPMSMMLSDTDMENLAAYYSTMK

Specific function: Unknown

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088
- InterPro:   IPR008168 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 10602; Mature: 10602

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
9.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIIGLAVIALMASAPALAAGDAAAGKAKSAICASCHGADGIAVIPGYPNLKGQNAQYI
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH
VSSLKAYKNKERSGGNSAIMQPMSMMLSDTDMENLAAYYSTMK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKIIGLAVIALMASAPALAAGDAAAGKAKSAICASCHGADGIAVIPGYPNLKGQNAQYI
CCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHH
VSSLKAYKNKERSGGNSAIMQPMSMMLSDTDMENLAAYYSTMK
HHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2829828 [H]