| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is yfeZ [C]
Identifier: 59712507
GI number: 59712507
Start: 2134291
End: 2134740
Strand: Reverse
Name: yfeZ [C]
Synonym: VF_1900
Alternate gene names: 59712507
Gene position: 2134740-2134291 (Counterclockwise)
Preceding gene: 59712509
Following gene: 59712506
Centisome position: 73.67
GC content: 38.44
Gene sequence:
>450_bases ATGCAGTATTCTTTTGATGCATATGATGAACATGGGTGGTTAAAGCCACCTGTTTGGTTGTGGTTTGGATGGGCGATTTT AATTCGTTCTGTTGTAGTTTTTGTTATGGCTGGTGCGAGTCGAGAACAAGGCACCGATTTATTAGCCTTGTTTTATCCTA GCCATGCGCATTTGTATACGAGTTTATGCTTAAGTCTACCTATATTGTTTTATATGTGGCTAAGCAGTTTCAAAAAGCCC ACACGGCCTTTTATGCTGACTCTTTGGAAGCAAGGACGGTGGCTAACCATTGTGATGGTTTTAATTGACCTTTCAATGTT AATTCAATCGGTTATTGTTAATCGAGGAGAGTTTCAGCCAGGAAGTGCAATGATTATCTTACTTCTTAGCTGGTTTCTTA TATTTTTATGTCGCAGTAAACGAGTAAAGATATGCTTTAGTCTGACTTAA
Upstream 100 bases:
>100_bases TAGCTCAAAGTTTTAATTTTATCCAATCGTTATTTTTAAACATTTCAGTAAGCTGAACAAGTCTACTGAGAAAGTTGTTA GTTAATTTTAAGGTAGAAAT
Downstream 100 bases:
>100_bases TGAGAGGGGGCAGACAATGGATCTATCAACAGGTGCATTATTATTTAGTGCGTTATTAAGCCCGCTAGCAATGGCGGATT GGCAATTGGATTTAGGGGTT
Product: COME operon protein 3
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYTSLCLSLPILFYMWLSSFKKP TRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQPGSAMIILLLSWFLIFLCRSKRVKICFSLT
Sequences:
>Translated_149_residues MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYTSLCLSLPILFYMWLSSFKKP TRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQPGSAMIILLLSWFLIFLCRSKRVKICFSLT >Mature_149_residues MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYTSLCLSLPILFYMWLSSFKKP TRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQPGSAMIILLLSWFLIFLCRSKRVKICFSLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17401; Mature: 17401
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH SLCLSLPILFYMWLSSFKKPTRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GSAMIILLLSWFLIFLCRSKRVKICFSLT CHHHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MQYSFDAYDEHGWLKPPVWLWFGWAILIRSVVVFVMAGASREQGTDLLALFYPSHAHLYT CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHHH SLCLSLPILFYMWLSSFKKPTRPFMLTLWKQGRWLTIVMVLIDLSMLIQSVIVNRGEFQP HHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC GSAMIILLLSWFLIFLCRSKRVKICFSLT CHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA