| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is crr [H]
Identifier: 59712504
GI number: 59712504
Start: 2132246
End: 2132755
Strand: Direct
Name: crr [H]
Synonym: VF_1897
Alternate gene names: 59712504
Gene position: 2132246-2132755 (Clockwise)
Preceding gene: 172087733
Following gene: 59712508
Centisome position: 73.59
GC content: 40.78
Gene sequence:
>510_bases ATGGGTCTGTTTGACAAAATTAAAAGCGCATTTTCTTCTGAAAGCGCTGACGCTGGTGCAATCGACATCATCGCACCTCT TTCTGGTGAAATTGTAAACATCGAAGATGTGCCAGACGTAGTGTTCGCTGAAAAAATCGTTGGTGACGGTATTGCTATAA AACCTGCTGGTAACAAAATGGTTGCTCCAGTAAACGGTACAATCGGTAAAATCTTTGAAACTAACCACGCTTTCTCTATC GAATCTAACGACGGCATCGAGCTTTTCGTTCACTTCGGTATTGATACAGTTGAACTTAAAGGCGAAGGCTTCACTCGTAT CGCTGAAGAAGGTCAAGAAGTTAAAGCTGGTGACACTATCATCGAATTCGATCTAGCTGTTCTTGAAGAAAAAGCTAAAT CAACGCTTACTCCAGTTGTTATCTCTAACATGGACGAAATCAAAGAGCTTACTAAGCTTTCTGGTGCTGTTACTGTTGGT GAATCTCCAGTTCTTAAAGTAACTAAGTAA
Upstream 100 bases:
>100_bases AATTTATCGCAGAAAATACTAAGTAATAGTATAGTGCAAAGAATTAAATATAGCCACTAAGTTTAGTGGCTATTTAATAT AAACTTTAGGGAGCTACACA
Downstream 100 bases:
>100_bases TCTTTAATAGATAACTTTAGTTAATTAAAGACAAAAAAAGGCCGCTGTTTTCTAAAGATAACAGCGGCCTTTTTGTATCT ATTCGGCTAATAATAGTAAG
Product: PTS system glucose-specific transporter subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Glc; EIII-Glc; PTS system glucose-specific EIIA component [H]
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MGLFDKIKSAFSSESADAGAIDIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPAGNKMVAPVNGTIGKIFETNHAFSI ESNDGIELFVHFGIDTVELKGEGFTRIAEEGQEVKAGDTIIEFDLAVLEEKAKSTLTPVVISNMDEIKELTKLSGAVTVG ESPVLKVTK
Sequences:
>Translated_169_residues MGLFDKIKSAFSSESADAGAIDIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPAGNKMVAPVNGTIGKIFETNHAFSI ESNDGIELFVHFGIDTVELKGEGFTRIAEEGQEVKAGDTIIEFDLAVLEEKAKSTLTPVVISNMDEIKELTKLSGAVTVG ESPVLKVTK >Mature_168_residues GLFDKIKSAFSSESADAGAIDIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPAGNKMVAPVNGTIGKIFETNHAFSIE SNDGIELFVHFGIDTVELKGEGFTRIAEEGQEVKAGDTIIEFDLAVLEEKAKSTLTPVVISNMDEIKELTKLSGAVTVGE SPVLKVTK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG2190
COG function: function code G; Phosphotransferase system IIA components
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788757, Length=169, Percent_Identity=83.4319526627219, Blast_Score=281, Evalue=1e-77, Organism=Escherichia coli, GI1786894, Length=149, Percent_Identity=46.3087248322148, Blast_Score=146, Evalue=7e-37, Organism=Escherichia coli, GI1790159, Length=148, Percent_Identity=39.8648648648649, Blast_Score=110, Evalue=7e-26,
Paralogues:
None
Copy number: 3540 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). 140 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR001127 [H]
Pfam domain/function: PF00358 PTS_EIIA_1 [H]
EC number: 2.7.1.69
Molecular weight: Translated: 17862; Mature: 17730
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLFDKIKSAFSSESADAGAIDIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPAGNKM CCHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCEEEEECCCEE VAPVNGTIGKIFETNHAFSIESNDGIELFVHFGIDTVELKGEGFTRIAEEGQEVKAGDTI EEECCCCEEEEEECCCEEEEECCCCEEEEEEECCEEEEECCCCCHHHHHCCCEECCCCEE IEFDLAVLEEKAKSTLTPVVISNMDEIKELTKLSGAVTVGESPVLKVTK EEHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCEEEECCCCEEEECC >Mature Secondary Structure GLFDKIKSAFSSESADAGAIDIIAPLSGEIVNIEDVPDVVFAEKIVGDGIAIKPAGNKM CHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEECCCCCHHHHHHHHCCCEEEEECCCEE VAPVNGTIGKIFETNHAFSIESNDGIELFVHFGIDTVELKGEGFTRIAEEGQEVKAGDTI EEECCCCEEEEEECCCEEEEECCCCEEEEEEECCEEEEECCCCCHHHHHCCCEECCCCEE IEFDLAVLEEKAKSTLTPVVISNMDEIKELTKLSGAVTVGESPVLKVTK EEHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHCCEEEECCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups; Phosphotransferases with an alcohol group as acceptor [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]