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The map label for this gene is flgF [H]

Identifier: 59712480

GI number: 59712480

Start: 2108049

End: 2108798

Strand: Reverse

Name: flgF [H]

Synonym: VF_1873

Alternate gene names: 59712480

Gene position: 2108798-2108049 (Counterclockwise)

Preceding gene: 59712481

Following gene: 59712479

Centisome position: 72.78

GC content: 40.93

Gene sequence:

>750_bases
ATGGATCGCGCATTATTTTTAGCCATGAGTGGCGCAAAGCAAAACATGCAAGCTATGCAATTGCGTTCAAACAACCTTGC
AAACGTAAGTACAACGGGTTTCCGTGCTGATTTAGAGCAAGCTCGTTCAATGCAAGCGTACGGTGAAGGTTTACCTACTC
GTGTATTTAATATGACTGAGCGTCCAGGAAGCAGTTTTTCTCAGGGTTCTGTGATCACTACAGGTCGTGATCTTGATTTA
ACTGTTGAAGGCGATGGTTGGATTTCAGTAATGGACAACACGGGTCGTGAAGGTTTAACTCGTGCTGGTAATCTAAAAAT
CGATGAAACGGGTTTACTAATGAATGGTAGTGGTCATGTTGTATTAGGTGAAAATGATGCACCGATTACACTACCGTTAC
CAATTGCAAAAATTCAAATTGCTAAAGACGGCACTATCTCTGTTCTTGAGCAAGGCGCACCAGCTGAAGCGATGGCTGAA
GTTGATCGTATCAAATTAGTAAAAACCGATAATCGTGACTTATTTAAAGATACCAATGGCTTATTTCGTTCAAAGAACCC
TGGCGCAACATTTGATGCTGATGCAAACATCACATTATTAAGTGGCGCACTAGAAGGAAGTAACGTTAACGCCGTTGGTG
AAATGACAAATTTAATTGATTTGCAGCGTCAGTTTGAAATGCAAGTCAAGATGATGAGTACAGCTGAAGAGATGGATAAA
GCTTCAGACTCATTATTACGTATGGGTTAA

Upstream 100 bases:

>100_bases
AAATAGCGTCTAATTTAAGTTAATTTATTGAAATATATAGAAAATAAAAGTTGGCACACTGATTGCTATTATAACTTCAG
ATAGATTATTGGAGTTCATT

Downstream 100 bases:

>100_bases
TTGAATAATTAACTTGATTAACTTAATACATTAAAGAATTTAGAGGAATACACAATGAATCCAGCATTATGGGTAAGTAA
AACAGGTTTAGACGCACAAC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSMQAYGEGLPTRVFNMTERPGSSFSQGSVITTGRDLDL
TVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSGHVVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAE
VDRIKLVKTDNRDLFKDTNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDK
ASDSLLRMG

Sequences:

>Translated_249_residues
MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSMQAYGEGLPTRVFNMTERPGSSFSQGSVITTGRDLDL
TVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSGHVVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAE
VDRIKLVKTDNRDLFKDTNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDK
ASDSLLRMG
>Mature_249_residues
MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSMQAYGEGLPTRVFNMTERPGSSFSQGSVITTGRDLDL
TVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSGHVVLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAE
VDRIKLVKTDNRDLFKDTNGLFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDK
ASDSLLRMG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=253, Percent_Identity=40.3162055335968, Blast_Score=177, Evalue=5e-46,
Organism=Escherichia coli, GI1787318, Length=263, Percent_Identity=29.6577946768061, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 26822; Mature: 26822

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSMQAYGEGLPTRVFNMTE
CCCEEEEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHEEECCC
RPGSSFSQGSVITTGRDLDLTVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSGHV
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCEEECCCCEE
VLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKDTNG
EECCCCCCEEEECCEEEEEEECCCCEEEEECCCCHHHHHHHHHEEEEECCCCHHHHCCCC
LFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDK
CEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASDSLLRMG
HHHHHHCCC
>Mature Secondary Structure
MDRALFLAMSGAKQNMQAMQLRSNNLANVSTTGFRADLEQARSMQAYGEGLPTRVFNMTE
CCCEEEEEECCCHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHEEECCC
RPGSSFSQGSVITTGRDLDLTVEGDGWISVMDNTGREGLTRAGNLKIDETGLLMNGSGHV
CCCCCCCCCCEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCEEECCCCEEECCCCEE
VLGENDAPITLPLPIAKIQIAKDGTISVLEQGAPAEAMAEVDRIKLVKTDNRDLFKDTNG
EECCCCCCEEEECCEEEEEEECCCCEEEEECCCCHHHHHHHHHEEEEECCCCHHHHCCCC
LFRSKNPGATFDADANITLLSGALEGSNVNAVGEMTNLIDLQRQFEMQVKMMSTAEEMDK
CEECCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASDSLLRMG
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]