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The map label for this gene is fliD [H]

Identifier: 59712467

GI number: 59712467

Start: 2090620

End: 2092590

Strand: Reverse

Name: fliD [H]

Synonym: VF_1860

Alternate gene names: 59712467

Gene position: 2092590-2090620 (Counterclockwise)

Preceding gene: 59712468

Following gene: 59712466

Centisome position: 72.22

GC content: 40.94

Gene sequence:

>1971_bases
ATGAGTGTTAGCCCGATGGGGATGGGTGGTGGCCTAGATATTAATTCTATGGTGAGCAAAATAGTTGAAAGCGAGCGCTT
ACCTAAGCAGCAGCGCATCGACCGTGAACGTTCAGACATAGATACTAATATTAGTGGTTACGGCCGTCTGCAAGAATCAT
TAGATACCATGAAGAATCTTATGACGACTTTCCGTCAAGACGACACATTTGCATCGAGAACTATCTCAAGTAGTGATGAA
GATGTAGTTAGTGCTACGGCGAGCCCTGATGCACTTGCTGGTCGTTATACTATTGACGTTTTACAACTTGCTCAAGCTCA
AAAGCTAGCATCGTCTCCTATTCGTGATGATGCTAAATTTGGCCCAGGTAAATTAGAAATATCGCTAGGTAAGAAATCAT
TTACTATAGATGTTGTCGGCCAAAATAATAAAATTACTGACATTTTAAAACAGATTAACAGTGCACCTTCAAACCCAGGT
GTGCAAGCTTCTATCGTAAAAGACGATGGTGGCTCTCGTTTAATTCTCGCATCTGATAAGCCTGGCGAAAGTAATAAAGT
TAAAATTGAAGTTGATGCAAAATACAATAACCAATTGCATCGATTTGCGTTTAACCCTGACTTTGATCCAACGGTATCAA
CAAAATTTGATATTCCAACATTGCTTCAATATCAGCAAGTGCCTGAAGTTGCCGCTCAACAAGTTCGTGAGCCAATTACA
GAGCAAGAAGTACCAGAGCTGAGTGACGAAGAAAAATACGCTTACTTTAAACCTTTGATTGATTATGCCAATCGTGAATT
AGCTCGTGAAGAAAAAGCAGCTAAAGAAATCATGATGCAGCAAGAAGCAACAGCGGCATTAGCGACGTTAGAAGATCCAA
CCGATCCAACATCTGGCATGTCAGGGTGGAGTGAGCGTACTGCAGGAACACTGCAAGCGGCACTTCCAAATGAAGATGAA
AAGATTGAATTAGCTAAAGCGGCAAAGCAAGGCGATCAAGATGCAGCTGAAGCGCTTGCAGAAATTGGACAAACGCCAGA
TACGGTTTTCCAAGCTGCTGGCATTACTTATGAAGCGCCTCAGAAAGAAGCACCGAAAAAAGAAATTGTTGATATAGCAA
AAGAAAAAGTAGAAAAACTGCCGCCAACAATTAAAGAAATAGCAAAAGAAAAATTAGAACCGATTGAAAAGGTTGTGGAG
ACAATTAAACCAGAAGGTCCACGCAAACCTTTATATTCTGGTCTTCAGGAAGTTCAATCGGCAAGTAGTGCGAAAGTGGT
CTTGGATGGTGTTGCAAGAATAAGCAGTGACACCAATGTAATTCAAGACGCGGTTCAAGGTGTTGATATCACTTTAAAAG
GTACAACAGCAGAAGCAAGCAAACGCATCGATTTAGATGTGCAGTTTGATAGAGATACTGTAAAAGCTGCTATCGAACAA
TTTGTAAATACTTACAATCAGTTCTATGAAACCACCAAGGCATTAAGTGGCTTTGATCCGGCAACAGGTCAAAGTGGTCC
ACTTGCCGGAGATAGTGTCGTACGTTCGGCTGAGTCTCGCTTAAAATCTGTATTTGTAGCGCCAGTTGAATCGGCTCCTA
CAGGAATAAAAACACTGATAGAGCTTGGTATTTCAACGACTCGACAAGGCACTCTTGAAATTAATCAATCAATGTTAGAT
CGTCAATTGAATGAAAATTTCAGTCAGTTGCATACTTTCTTTGGTGGTTCAAAAGGTTTTGCTAAAAAGGTTGAAGACGT
TATTCAAAGCATGACAGGGGTGAGTGGTCCAATCCGTACACGAATGAATACGATGCGAGATCAAAATTATCGCCTTAATG
ATCAGCAGGTGGATTTAGATCGCCGAATGGAAAGTCTTCAAGAGCGTACGCGTAATAAATTTGCCAATATGCAAGATGTA
ACCGGAAAAATGAAAGCGCAGTTATCAGGTATGATGAATGCGTTGGGTTAA

Upstream 100 bases:

>100_bases
TCCCGATGAAAAGATGTTGGAAGTTGCTAGAGATTTAGCTGCCAGTGCATCTGGATTGATAGCTGAGAGGATTTAAACCG
TTAATTGAGGAAAGCGATTC

Downstream 100 bases:

>100_bases
TGCAACCTTGTTACTGGTATAGAGGTTACCGATGGAATTACTAAAGCAATTAGAAGTATTAGACCAAGAGTTGCAAAAAC
AATATCGTAGTGAAGATATT

Product: flagellar capping protein

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 656; Mature: 655

Protein sequence:

>656_residues
MSVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNLMTTFRQDDTFASRTISSSDE
DVVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKFGPGKLEISLGKKSFTIDVVGQNNKITDILKQINSAPSNPG
VQASIVKDDGGSRLILASDKPGESNKVKIEVDAKYNNQLHRFAFNPDFDPTVSTKFDIPTLLQYQQVPEVAAQQVREPIT
EQEVPELSDEEKYAYFKPLIDYANRELAREEKAAKEIMMQQEATAALATLEDPTDPTSGMSGWSERTAGTLQAALPNEDE
KIELAKAAKQGDQDAAEALAEIGQTPDTVFQAAGITYEAPQKEAPKKEIVDIAKEKVEKLPPTIKEIAKEKLEPIEKVVE
TIKPEGPRKPLYSGLQEVQSASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDTVKAAIEQ
FVNTYNQFYETTKALSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPTGIKTLIELGISTTRQGTLEINQSMLD
RQLNENFSQLHTFFGGSKGFAKKVEDVIQSMTGVSGPIRTRMNTMRDQNYRLNDQQVDLDRRMESLQERTRNKFANMQDV
TGKMKAQLSGMMNALG

Sequences:

>Translated_656_residues
MSVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNLMTTFRQDDTFASRTISSSDE
DVVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKFGPGKLEISLGKKSFTIDVVGQNNKITDILKQINSAPSNPG
VQASIVKDDGGSRLILASDKPGESNKVKIEVDAKYNNQLHRFAFNPDFDPTVSTKFDIPTLLQYQQVPEVAAQQVREPIT
EQEVPELSDEEKYAYFKPLIDYANRELAREEKAAKEIMMQQEATAALATLEDPTDPTSGMSGWSERTAGTLQAALPNEDE
KIELAKAAKQGDQDAAEALAEIGQTPDTVFQAAGITYEAPQKEAPKKEIVDIAKEKVEKLPPTIKEIAKEKLEPIEKVVE
TIKPEGPRKPLYSGLQEVQSASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDTVKAAIEQ
FVNTYNQFYETTKALSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPTGIKTLIELGISTTRQGTLEINQSMLD
RQLNENFSQLHTFFGGSKGFAKKVEDVIQSMTGVSGPIRTRMNTMRDQNYRLNDQQVDLDRRMESLQERTRNKFANMQDV
TGKMKAQLSGMMNALG
>Mature_655_residues
SVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNLMTTFRQDDTFASRTISSSDED
VVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKFGPGKLEISLGKKSFTIDVVGQNNKITDILKQINSAPSNPGV
QASIVKDDGGSRLILASDKPGESNKVKIEVDAKYNNQLHRFAFNPDFDPTVSTKFDIPTLLQYQQVPEVAAQQVREPITE
QEVPELSDEEKYAYFKPLIDYANRELAREEKAAKEIMMQQEATAALATLEDPTDPTSGMSGWSERTAGTLQAALPNEDEK
IELAKAAKQGDQDAAEALAEIGQTPDTVFQAAGITYEAPQKEAPKKEIVDIAKEKVEKLPPTIKEIAKEKLEPIEKVVET
IKPEGPRKPLYSGLQEVQSASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDTVKAAIEQF
VNTYNQFYETTKALSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPTGIKTLIELGISTTRQGTLEINQSMLDR
QLNENFSQLHTFFGGSKGFAKKVEDVIQSMTGVSGPIRTRMNTMRDQNYRLNDQQVDLDRRMESLQERTRNKFANMQDVT
GKMKAQLSGMMNALG

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=197, Percent_Identity=33.502538071066, Blast_Score=64, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 71847; Mature: 71715

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNL
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
MTTFRQDDTFASRTISSSDEDVVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKF
HHHHHCCCHHHHHHCCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GPGKLEISLGKKSFTIDVVGQNNKITDILKQINSAPSNPGVQASIVKDDGGSRLILASDK
CCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCC
PGESNKVKIEVDAKYNNQLHRFAFNPDFDPTVSTKFDIPTLLQYQQVPEVAAQQVREPIT
CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EQEVPELSDEEKYAYFKPLIDYANRELAREEKAAKEIMMQQEATAALATLEDPTDPTSGM
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SGWSERTAGTLQAALPNEDEKIELAKAAKQGDQDAAEALAEIGQTPDTVFQAAGITYEAP
CCCHHHCCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC
QKEAPKKEIVDIAKEKVEKLPPTIKEIAKEKLEPIEKVVETIKPEGPRKPLYSGLQEVQS
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
ASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDTVKAAIEQ
CCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHCCCCCCEEEEECHHHHHHHHHH
FVNTYNQFYETTKALSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPTGIKTLI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ELGISTTRQGTLEINQSMLDRQLNENFSQLHTFFGGSKGFAKKVEDVIQSMTGVSGPIRT
HHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
RMNTMRDQNYRLNDQQVDLDRRMESLQERTRNKFANMQDVTGKMKAQLSGMMNALG
HHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVSPMGMGGGLDINSMVSKIVESERLPKQQRIDRERSDIDTNISGYGRLQESLDTMKNL
CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
MTTFRQDDTFASRTISSSDEDVVSATASPDALAGRYTIDVLQLAQAQKLASSPIRDDAKF
HHHHHCCCHHHHHHCCCCCCHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHCCCCCCCCCC
GPGKLEISLGKKSFTIDVVGQNNKITDILKQINSAPSNPGVQASIVKDDGGSRLILASDK
CCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCC
PGESNKVKIEVDAKYNNQLHRFAFNPDFDPTVSTKFDIPTLLQYQQVPEVAAQQVREPIT
CCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
EQEVPELSDEEKYAYFKPLIDYANRELAREEKAAKEIMMQQEATAALATLEDPTDPTSGM
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
SGWSERTAGTLQAALPNEDEKIELAKAAKQGDQDAAEALAEIGQTPDTVFQAAGITYEAP
CCCHHHCCCHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCC
QKEAPKKEIVDIAKEKVEKLPPTIKEIAKEKLEPIEKVVETIKPEGPRKPLYSGLQEVQS
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHC
ASSAKVVLDGVARISSDTNVIQDAVQGVDITLKGTTAEASKRIDLDVQFDRDTVKAAIEQ
CCCCHHHHHHHHHHCCCHHHHHHHHCCCEEEEECCCHHCCCCCCEEEEECHHHHHHHHHH
FVNTYNQFYETTKALSGFDPATGQSGPLAGDSVVRSAESRLKSVFVAPVESAPTGIKTLI
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
ELGISTTRQGTLEINQSMLDRQLNENFSQLHTFFGGSKGFAKKVEDVIQSMTGVSGPIRT
HHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHH
RMNTMRDQNYRLNDQQVDLDRRMESLQERTRNKFANMQDVTGKMKAQLSGMMNALG
HHHHHHCCCCCCCCHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]