Click here to switch to the map view.

The map label for this gene is fliH [C]

Identifier: 59712457

GI number: 59712457

Start: 2081436

End: 2082233

Strand: Reverse

Name: fliH [C]

Synonym: VF_1850

Alternate gene names: 59712457

Gene position: 2082233-2081436 (Counterclockwise)

Preceding gene: 59712458

Following gene: 59712456

Centisome position: 71.86

GC content: 39.6

Gene sequence:

>798_bases
ATGAGTATTAGCAAAAAACGTGGCTTTATCCGCATTACCGATGAGAGTGAACTACAAAAAACCAATATTTGGGAGTCCCC
AGATTACTCTGATCCAAATAAGCCTGCTCGTGAAACTGCTTTTAATTACGATCCAAGTTGGACTCCATCGCTTCCAAAAG
AAGAAGAGCCTGAAGAATTTGTTTTAACAGAAGAAATCATTGAGCAAATTAAGCAAGGCGCTTACAACGAAGGTTTAATG
GAAGGCCAAGAGTTTGGCTACAAAGAAGGTTTAGAAAAAGGTCAAGCGGAAGGCTTTGAAGCAGGGAAGCCTGAAGGTTA
TCAAGTTGGTTATGATGAAGGGATTGCGGCAGGCCAAGCTGAGATTCAAGAACGTATTCAACAGTTAATTGCTATGGCTG
ATAAGTTTGCTGAGCCATTAGCATTGCTTGATTCTCAAGTTGAAAAACAATTAATTGATATGGTGTTAGCACTGACTAAA
GAAGTGGTTCACGTAGAAGTAAAAACAAACCCTCAAGTTATTTTAGATACAGTTCGAGAGTCTGTAGAAACACTGCCTGT
TACAGAGCGTGAAATTAATATTGCGTTGAATCCAGAAGATCACCAACGTATCATTGACGCATATGGTGAGGAAGCATTAG
CACAAAAGCAGTGGACATTAACCGCAGAGCCGTCGATGAATTTGGGGGATATTAATATTCAAGCTTCTGATTCAAAAGTG
AGTTATTTGCTAGAAGAACGAATTAAGAGCGTACTGAACAAATTCTGTGGTGTGAACCGTCATCAAGGAAATCAGTAA

Upstream 100 bases:

>100_bases
GTTTTCATTTCATTGAGTTATAATTAAACGGCTATTTCATAATTGGATTGAAATAGCCGTTATTCTTTCTAAATCTTCTT
CTTTTTTACGAGTTATCATC

Downstream 100 bases:

>100_bases
TGTTGCCATTATCTGAACGTTTATCTCAATATAAAACCACAGGCTTAACCACTCGCGCTATTGCCTCAGGTAAATTAGTG
CGTGTTGTTGGTTTAACACT

Product: flagellar assembly protein H

Products: NA

Alternate protein names: Flagellar Assembly Protein FliH; Flagellar Assembly Protein; Polar Flagellar Assembly Protein FliH; Lateral Flagellar Assembly Protein FliH

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MSISKKRGFIRITDESELQKTNIWESPDYSDPNKPARETAFNYDPSWTPSLPKEEEPEEFVLTEEIIEQIKQGAYNEGLM
EGQEFGYKEGLEKGQAEGFEAGKPEGYQVGYDEGIAAGQAEIQERIQQLIAMADKFAEPLALLDSQVEKQLIDMVLALTK
EVVHVEVKTNPQVILDTVRESVETLPVTEREINIALNPEDHQRIIDAYGEEALAQKQWTLTAEPSMNLGDINIQASDSKV
SYLLEERIKSVLNKFCGVNRHQGNQ

Sequences:

>Translated_265_residues
MSISKKRGFIRITDESELQKTNIWESPDYSDPNKPARETAFNYDPSWTPSLPKEEEPEEFVLTEEIIEQIKQGAYNEGLM
EGQEFGYKEGLEKGQAEGFEAGKPEGYQVGYDEGIAAGQAEIQERIQQLIAMADKFAEPLALLDSQVEKQLIDMVLALTK
EVVHVEVKTNPQVILDTVRESVETLPVTEREINIALNPEDHQRIIDAYGEEALAQKQWTLTAEPSMNLGDINIQASDSKV
SYLLEERIKSVLNKFCGVNRHQGNQ
>Mature_264_residues
SISKKRGFIRITDESELQKTNIWESPDYSDPNKPARETAFNYDPSWTPSLPKEEEPEEFVLTEEIIEQIKQGAYNEGLME
GQEFGYKEGLEKGQAEGFEAGKPEGYQVGYDEGIAAGQAEIQERIQQLIAMADKFAEPLALLDSQVEKQLIDMVLALTKE
VVHVEVKTNPQVILDTVRESVETLPVTEREINIALNPEDHQRIIDAYGEEALAQKQWTLTAEPSMNLGDINIQASDSKVS
YLLEERIKSVLNKFCGVNRHQGNQ

Specific function: Needed For Flagellar Regrowth And Assembly. [C]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082004, Length=222, Percent_Identity=24.7747747747748, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29887; Mature: 29756

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISKKRGFIRITDESELQKTNIWESPDYSDPNKPARETAFNYDPSWTPSLPKEEEPEEF
CCCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH
VLTEEIIEQIKQGAYNEGLMEGQEFGYKEGLEKGQAEGFEAGKPEGYQVGYDEGIAAGQA
HHHHHHHHHHHHCCCCCCHHCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
EIQERIQQLIAMADKFAEPLALLDSQVEKQLIDMVLALTKEVVHVEVKTNPQVILDTVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
SVETLPVTEREINIALNPEDHQRIIDAYGEEALAQKQWTLTAEPSMNLGDINIQASDSKV
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCHHH
SYLLEERIKSVLNKFCGVNRHQGNQ
HHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SISKKRGFIRITDESELQKTNIWESPDYSDPNKPARETAFNYDPSWTPSLPKEEEPEEF
CCCCCCCEEEECCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCHHH
VLTEEIIEQIKQGAYNEGLMEGQEFGYKEGLEKGQAEGFEAGKPEGYQVGYDEGIAAGQA
HHHHHHHHHHHHCCCCCCHHCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHH
EIQERIQQLIAMADKFAEPLALLDSQVEKQLIDMVLALTKEVVHVEVKTNPQVILDTVRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHH
SVETLPVTEREINIALNPEDHQRIIDAYGEEALAQKQWTLTAEPSMNLGDINIQASDSKV
HHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEECCHHH
SYLLEERIKSVLNKFCGVNRHQGNQ
HHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA