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The map label for this gene is flhF [H]

Identifier: 59712443

GI number: 59712443

Start: 2068115

End: 2069593

Strand: Reverse

Name: flhF [H]

Synonym: VF_1836

Alternate gene names: 59712443

Gene position: 2069593-2068115 (Counterclockwise)

Preceding gene: 59712444

Following gene: 59712442

Centisome position: 71.43

GC content: 40.37

Gene sequence:

>1479_bases
TTGAAAATTAAACGATTTTTTGCAAAAGACATGCGCTCTGCTCTGGTTCAGGTAAAAGAAGAGCTAGGTGTTGACGCTGT
CATTATGTCAAATAAAAAAGTAACCGGTGGTATTGAAATTGTTGCAGCTATTGATCCGAGTGCGCAATCTCAATCATTTC
CAGCAGTATCACAGCGTCAAGTTGAAGAAGACAAGGTGAGTGTTGGTAAAGGTTCTATGACACGTCGTTTTGCAAATATG
ATCAAGCAATATGGCTCACATAATAGTTCTCCAGAGCCTGAGCCAGAAAAAGCTGAGCGTGAAGAAGACAGTTTAGCAGC
GTTATTGCAACGTCAGTCTAAATTTCAGACTCAGTCATCAGCAAACTCGTATTCAAATTCTGCGTCTACTCCAAGATTAG
ATACATCAGAAATGACTCGTGCGATTCAAAATAATCCAAAATTAGCGCACCTTATTTCTGATGAGCCAGTTCGACATTCA
ACTGAGCGAACACAACCGAAATTAGACCCTTCTCGTTATGAGAAAGGTCGTCGTTCGCATAACGAATCGAACGAAGAATT
AGAAAACATGCGCTCTGAAATGTCATCTATTCGTCGTTTATTAGAGCATCAAGTATCTGGTCTTATGTGGCAGGAAGTAG
AGCGTCGTGAACCTCTACGAGCAATGCTTATTAAGCGTCTAGAGAAAATGGGGTTATCAGAAGAGCTTGCTGATCAACTT
GCTTGTTATATTCCAGAAGATGTACCAGCAAAAGATGCATGGCCTGCATTATTGAAACTACTTGCTGAGCAAATCCCAAC
CTCAAAAGTGGATACGCTATCACGTGGTGGCATCATTGCATTATTAGGTCCTACAGGGGTTGGCAAAACAACAACTATTG
CTAAATTAGCTGCTCGTGCAGCAATGGAATATGGTCCTGACCAAGTAGCATTAGTTACAACAGATACATTCCGTATTGGT
GCTCAAGAACAATTGGCTATTTATGGCCGCATTATGGGCTGTCCAGTACGAATTGCTAAAGATGCTGATGAATTAGCATC
GGTTCTGTATCAATTACGTAATCGTCGTTTAGTGCTTGTGGATACTGCAGGTATGGGACAACGTGATGTACGTTTAACAG
AACAATTAGATACGATTATGGAAAACAGTGGATCACAAATTAATAGCTATCTTGTGATGCCAGCAACGGCACAACGCCGA
GTACTGCAAGAAACCATTGATCACTTCAAACGCATTCCATTATCTGGTTGTATTTTAAGTAAAATCGATGAATCTCTAAG
TTTAGGTGAATTAATTAGTGTAACTATAGAGAATGGCCTTCCAATCTCTTATATTGCAAATGGGCAACGTGTTCCTGAGG
ACATTGTTTTAGCTCAACCAAAATACTTAGTTGCAAAGGCAAATGAATTACTAGAAAAAGCGACGGAAAAGGACCCTCAT
TTCTGGAATAGTGATATGCCAGAGGCGGACAATTTATGA

Upstream 100 bases:

>100_bases
AGTTCTCTCTTACCAAGAGATCCCTGATGAGAAACAAATTAGAATTGTTCAAGCTGTTGGTAACTAACCGCGTCAACTTA
TTTAACGCAGGAATACGATA

Downstream 100 bases:

>100_bases
TTGATAATAATATATACGATCAGGCTAGTGGATTACGACGCTTAACCAAACCAACATTGACCAAAGTGGTTGCTGTAACG
GGTGGTAAAGGTGGCGTAGG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MKIKRFFAKDMRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPSAQSQSFPAVSQRQVEEDKVSVGKGSMTRRFANM
IKQYGSHNSSPEPEPEKAEREEDSLAALLQRQSKFQTQSSANSYSNSASTPRLDTSEMTRAIQNNPKLAHLISDEPVRHS
TERTQPKLDPSRYEKGRRSHNESNEELENMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQL
ACYIPEDVPAKDAWPALLKLLAEQIPTSKVDTLSRGGIIALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIG
AQEQLAIYGRIMGCPVRIAKDADELASVLYQLRNRRLVLVDTAGMGQRDVRLTEQLDTIMENSGSQINSYLVMPATAQRR
VLQETIDHFKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPH
FWNSDMPEADNL

Sequences:

>Translated_492_residues
MKIKRFFAKDMRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPSAQSQSFPAVSQRQVEEDKVSVGKGSMTRRFANM
IKQYGSHNSSPEPEPEKAEREEDSLAALLQRQSKFQTQSSANSYSNSASTPRLDTSEMTRAIQNNPKLAHLISDEPVRHS
TERTQPKLDPSRYEKGRRSHNESNEELENMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQL
ACYIPEDVPAKDAWPALLKLLAEQIPTSKVDTLSRGGIIALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIG
AQEQLAIYGRIMGCPVRIAKDADELASVLYQLRNRRLVLVDTAGMGQRDVRLTEQLDTIMENSGSQINSYLVMPATAQRR
VLQETIDHFKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPH
FWNSDMPEADNL
>Mature_492_residues
MKIKRFFAKDMRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPSAQSQSFPAVSQRQVEEDKVSVGKGSMTRRFANM
IKQYGSHNSSPEPEPEKAEREEDSLAALLQRQSKFQTQSSANSYSNSASTPRLDTSEMTRAIQNNPKLAHLISDEPVRHS
TERTQPKLDPSRYEKGRRSHNESNEELENMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQL
ACYIPEDVPAKDAWPALLKLLAEQIPTSKVDTLSRGGIIALLGPTGVGKTTTIAKLAARAAMEYGPDQVALVTTDTFRIG
AQEQLAIYGRIMGCPVRIAKDADELASVLYQLRNRRLVLVDTAGMGQRDVRLTEQLDTIMENSGSQINSYLVMPATAQRR
VLQETIDHFKRIPLSGCILSKIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPH
FWNSDMPEADNL

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=190, Percent_Identity=33.1578947368421, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 54780; Mature: 54780

Theoretical pI: Translated: 6.22; Mature: 6.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKRFFAKDMRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPSAQSQSFPAVSQRQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCHHHHH
VEEDKVSVGKGSMTRRFANMIKQYGSHNSSPEPEPEKAEREEDSLAALLQRQSKFQTQSS
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ANSYSNSASTPRLDTSEMTRAIQNNPKLAHLISDEPVRHSTERTQPKLDPSRYEKGRRSH
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHCC
NESNEELENMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHH
ACYIPEDVPAKDAWPALLKLLAEQIPTSKVDTLSRGGIIALLGPTGVGKTTTIAKLAARA
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
AMEYGPDQVALVTTDTFRIGAQEQLAIYGRIMGCPVRIAKDADELASVLYQLRNRRLVLV
HHHCCCCCEEEEEECCEECCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCEEEEE
DTAGMGQRDVRLTEQLDTIMENSGSQINSYLVMPATAQRRVLQETIDHFKRIPLSGCILS
ECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHH
KIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPH
HHHHHCCHHHHHEEEECCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
FWNSDMPEADNL
CCCCCCCCCCCC
>Mature Secondary Structure
MKIKRFFAKDMRSALVQVKEELGVDAVIMSNKKVTGGIEIVAAIDPSAQSQSFPAVSQRQ
CCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEECCCEEEEEEECCCCCCCCCCCHHHHH
VEEDKVSVGKGSMTRRFANMIKQYGSHNSSPEPEPEKAEREEDSLAALLQRQSKFQTQSS
HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ANSYSNSASTPRLDTSEMTRAIQNNPKLAHLISDEPVRHSTERTQPKLDPSRYEKGRRSH
CCCCCCCCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHCCCCCCHHHHHHHHHCC
NESNEELENMRSEMSSIRRLLEHQVSGLMWQEVERREPLRAMLIKRLEKMGLSEELADQL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHH
ACYIPEDVPAKDAWPALLKLLAEQIPTSKVDTLSRGGIIALLGPTGVGKTTTIAKLAARA
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHH
AMEYGPDQVALVTTDTFRIGAQEQLAIYGRIMGCPVRIAKDADELASVLYQLRNRRLVLV
HHHCCCCCEEEEEECCEECCCHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCEEEEE
DTAGMGQRDVRLTEQLDTIMENSGSQINSYLVMPATAQRRVLQETIDHFKRIPLSGCILS
ECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHH
KIDESLSLGELISVTIENGLPISYIANGQRVPEDIVLAQPKYLVAKANELLEKATEKDPH
HHHHHCCHHHHHEEEECCCCCEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHCCCCC
FWNSDMPEADNL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9503621 [H]