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The map label for this gene is soj [H]

Identifier: 59712436

GI number: 59712436

Start: 2061200

End: 2061967

Strand: Reverse

Name: soj [H]

Synonym: VF_1829

Alternate gene names: 59712436

Gene position: 2061967-2061200 (Counterclockwise)

Preceding gene: 59712437

Following gene: 172087730

Centisome position: 71.16

GC content: 38.67

Gene sequence:

>768_bases
ATGATTGTCTGGAGCATAGCTAATCAGAAAGGTGGCGTGGGTAAAACCACAACCACAATCACATTAGCAGGGTTGTTAAA
TCAACGTGGTAAACGTGTACTAATGGTAGATACAGATCCCCATGGGTCTCTAACTACTTACTTAGGCTATGATTCAGACG
ATTTACCATGCAGCTTATTTGAGTTGTTTCAACTACCTACAATCAATAAAACCACGGTAGCTCCTTTTGTATTAAAAAGT
GATATCCCAGGGCTTGATATTATTCCTGCTCATATGTCACTTGCGACACTTGATCGTGTTATGGGAAACCGTAATGGGAT
GGGGTTAGTATTGAAGCGTGCACTGAAAGCACTAGAAGCGGATTACGATTATGTATTGATTGATTGTCCACCGATTCTTG
GTGTGATGATGGTTAATGCATTAGCGGCAAGTACTCGAGTGCTTATTCCTGTTCAAACTGAATTCCTAGCGATGAAAGGT
TTAGAACGAATGATGAGAACATTAACGATAATGCAAAGAAATAAACCTTCTTTGTTTGATGTGACCATTATTCCGACTAT
GTACGATAAGCGTACTAATGCTTCGTTACAAACCTTGATGGATTTAAAAAATAGCTATCAAGATCAAGTGTGGGCATCAG
CAGTACCTATTGATACAAAATTTAGAGATGCCAGCTTAAAAAGAATGCCACCGTCATTTGTATCTCCAAATAGTCGTGGC
GTTTTTGCGTATAAAACATTACTGAATTACTTGGAGAGATTAGCTTAA

Upstream 100 bases:

>100_bases
CTCAAGCTGTCGATAAAGCCGGTTTATCTTCAGAAAGTTTACCGCTTGATCGTATTGCTGAAAGAATGCTTGTTGAAGTT
GGATTGAAGTAGGAAATAAC

Downstream 100 bases:

>100_bases
TGGCTGATTTTAAAACATTTACCAGTGAAGAAGCTCTTGATGATTATTTCTCGTCACTGTTAGATGAAGATGTCATTGAG
CAAGACGTTAATCTTGAAGA

Product: chromosome partitioning protein ParA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNQRGKRVLMVDTDPHGSLTTYLGYDSDDLPCSLFELFQLPTINKTTVAPFVLKS
DIPGLDIIPAHMSLATLDRVMGNRNGMGLVLKRALKALEADYDYVLIDCPPILGVMMVNALAASTRVLIPVQTEFLAMKG
LERMMRTLTIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMDLKNSYQDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLA

Sequences:

>Translated_255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNQRGKRVLMVDTDPHGSLTTYLGYDSDDLPCSLFELFQLPTINKTTVAPFVLKS
DIPGLDIIPAHMSLATLDRVMGNRNGMGLVLKRALKALEADYDYVLIDCPPILGVMMVNALAASTRVLIPVQTEFLAMKG
LERMMRTLTIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMDLKNSYQDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLA
>Mature_255_residues
MIVWSIANQKGGVGKTTTTITLAGLLNQRGKRVLMVDTDPHGSLTTYLGYDSDDLPCSLFELFQLPTINKTTVAPFVLKS
DIPGLDIIPAHMSLATLDRVMGNRNGMGLVLKRALKALEADYDYVLIDCPPILGVMMVNALAASTRVLIPVQTEFLAMKG
LERMMRTLTIMQRNKPSLFDVTIIPTMYDKRTNASLQTLMDLKNSYQDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
VFAYKTLLNYLERLA

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28336; Mature: 28336

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVWSIANQKGGVGKTTTTITLAGLLNQRGKRVLMVDTDPHGSLTTYLGYDSDDLPCSLF
CEEEEECCCCCCCCCCHHHEEHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCHHHH
ELFQLPTINKTTVAPFVLKSDIPGLDIIPAHMSLATLDRVMGNRNGMGLVLKRALKALEA
HHHCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
DYDYVLIDCPPILGVMMVNALAASTRVLIPVQTEFLAMKGLERMMRTLTIMQRNKPSLFD
CCCEEEEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTIIPTMYDKRTNASLQTLMDLKNSYQDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
VFAYKTLLNYLERLA
CHHHHHHHHHHHHHC
>Mature Secondary Structure
MIVWSIANQKGGVGKTTTTITLAGLLNQRGKRVLMVDTDPHGSLTTYLGYDSDDLPCSLF
CEEEEECCCCCCCCCCHHHEEHHHHHHHCCCEEEEEECCCCCCEEEEECCCCCCCCHHHH
ELFQLPTINKTTVAPFVLKSDIPGLDIIPAHMSLATLDRVMGNRNGMGLVLKRALKALEA
HHHCCCCCCCCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC
DYDYVLIDCPPILGVMMVNALAASTRVLIPVQTEFLAMKGLERMMRTLTIMQRNKPSLFD
CCCEEEEECCHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
VTIIPTMYDKRTNASLQTLMDLKNSYQDQVWASAVPIDTKFRDASLKRMPPSFVSPNSRG
EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCC
VFAYKTLLNYLERLA
CHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]