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The map label for this gene is asmA [H]

Identifier: 59712358

GI number: 59712358

Start: 1975699

End: 1977834

Strand: Reverse

Name: asmA [H]

Synonym: VF_1751

Alternate gene names: 59712358

Gene position: 1977834-1975699 (Counterclockwise)

Preceding gene: 59712359

Following gene: 59712354

Centisome position: 68.26

GC content: 34.83

Gene sequence:

>2136_bases
GTGAAGAAAATAGCCCTATTAATTAGTATACCGTTTATTGCAGTAATCGGTGCTGTATTGGTATTAGTGTTACTTGTTAA
CCCTAATGAATTTAAACCGTTAATCACAGAGCAAGTTGAAGCTCAAACTGGTCGTCAATTAACGATAGATGGTGATATTG
AATGGCGCTTTTTTCCATCAATAGGCTTTTCGATCGGAAAAATGGCATTAAGTAACCCTGAAGGGTTTGTTGAGCCTAAT
TTAGTGTCATTTGATAATGCAATACTTGATCTTAATGTACGTCCGTTATTTCAACAGGAAGTCAGTATTGGTCTTATCAC
GTTAGATGGTGCTTCATTTACGTTACACACATTAAAAAATGGAGTTACTAATTTAGATGGTCTTGTCGCTAAAAAAGAAA
CATCAACAGTAGAAAATAATAATCCAACGGCTCCAGCAGAAGAGACTGACGTTAATCCAGAAGCATCATCAGCAACAAGT
ACAGAGTTCAATGGTTGGAAAGTCTCTTTACAAGGTATTGCTTTAACTAATGCTGAAGTGCTTATCCAAGATGATAAAGC
AGGTTCAAAAATTCACTTTAGTGATATGAATTTATCCCTTTCACAGTTCATTCCAGGGCAGTGGGCCAAATTAAATTTTG
ATTTAAAAGGGGACTTAGGTAAGCAAAAAGTCGCACTAAAAGGGAAAACAGAGCTTAATATAGCTGAAACGCTAGATGAT
GCTTCATTTAAGAATGTTGAATTTAATGCATCGTATGCTGATGCCGTAAATAAATTTAATGATATTACCTTTACAATTGA
TCAATTTTCTTTTGATAAATGGGCTAATTTAGTTTTAAAAGTAAAAGGTAAAGCAAATAATTTAGAGGTTAATTCGAATT
CAACATTTGCTCTTTATGTACCAAAAGCGTTAGACCTAATTAAAATCAAGGAATTCACAAGTACTAATAATGTGAAGGGA
AAAGGCATTCCAAATGAAGATGTGACTGCTGTTATTGGATTTAATAGTTCCTTTGCTCTAAACAAATCGTTCTTGAAGAT
AGACAAGCTTGCTTTATCAGCGGTCGATACCGATTTTACTGGTAAGCTAAGCGTTCAATTAAATGATATTCCTAAAGTTC
GCTTTGATCTACGTAGCCCAAGTATTGATGTTGATGCTTTACTAGCTACGTTACCAAAAGATGAGTCATCTAAAACAGTA
GATTCAACGACATCAACAAAAGCGTCATCTACACCAGTAAAAGAAGTGGAACCTGACTTAAGTGCATTGAAAACGTTAGA
TGTTGCGGGTTCAATCATTATTGATAAATTTAAAGCTAATAACGCAAAAATGCAGAATGTGACGTCTGTGTTCTCTGTTA
ATCGTGGAGTACTGAAATTAACGAAATTTCATTCTGATTTATACAGTGGTGGAATTGATATGACTGCAACACTTGATGCT
CGAAAATCAGTACCGACTTATAGCGTTAAACAGACGATTAAAGGAGTAAAAGTTGCGCCTTTATTAACGGATGTTATGGG
TGAAAGTCTTGTAGAAGGTACAGGTAATATAGCGATTAATGCATCAGGGAAAAGTTTAAAACCAACGGCACTTAAGCAGA
ATCTTAAAGGGAAAGTTTCGATTAACTTTGCTGATGGTGCTGTAAATGGTATTAACATTCCGTTATTAATCCGTACTACT
TATGCAAAGATTAAAGGTGAAAAAGTTAAAGGAAGCGAAGAAGCTGAAAAAACAGATTTCAGTGCCCTTACTGCAGACTT
TTATCTAGCAAACGGTAATGCAACAACTAAAAATATTAAGATGGTTTCTCCTCTGCTTCGTATTCATGGTGAAGGTTCTG
CACATTATGTGAATGAAACAGCAAACATGCTGATTAAAACGTCTATTGTGGGCACATTAAAGGGACAGGGCGGTAAGGAT
ATTGACGATCTAAAAGATGTGACGATTCCAATTCGAGTAACGGGATCTTGGACAAACCCTAAATATAAACTTGAATTCGA
TGATGTGATGAAACAAAAAGCACAAAAAGAAATTGATCGTGGTATTGAGAAGCTAGAAGAAAAATATGGCGATAAGATTA
AAGATGAAAAAGTAAAAGATGCAGCAAATAAATTACTTAAAGGACTTTTTAACTAA

Upstream 100 bases:

>100_bases
CCAATATATAACTATCGATAAGCTCATGTTTATTATGCTTAACTGATGGCATACTTAACACTATCGTTACTATTTAAGAA
CAATTAGATGGATTTTGGCC

Downstream 100 bases:

>100_bases
GTTTGATCTATAGCATCATATAAAGAAATGGCCTGCATCATTAAGATTGTAGGCCATTTTTGTTTTAGACATTACCAATC
AATGCCTTTTAACGCTTTAA

Product: assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 711; Mature: 711

Protein sequence:

>711_residues
MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPSIGFSIGKMALSNPEGFVEPN
LVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKNGVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATS
TEFNGWKVSLQGIALTNAEVLIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD
ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYVPKALDLIKIKEFTSTNNVKG
KGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTDFTGKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTV
DSTTSTKASSTPVKEVEPDLSALKTLDVAGSIIIDKFKANNAKMQNVTSVFSVNRGVLKLTKFHSDLYSGGIDMTATLDA
RKSVPTYSVKQTIKGVKVAPLLTDVMGESLVEGTGNIAINASGKSLKPTALKQNLKGKVSINFADGAVNGINIPLLIRTT
YAKIKGEKVKGSEEAEKTDFSALTADFYLANGNATTKNIKMVSPLLRIHGEGSAHYVNETANMLIKTSIVGTLKGQGGKD
IDDLKDVTIPIRVTGSWTNPKYKLEFDDVMKQKAQKEIDRGIEKLEEKYGDKIKDEKVKDAANKLLKGLFN

Sequences:

>Translated_711_residues
MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPSIGFSIGKMALSNPEGFVEPN
LVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKNGVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATS
TEFNGWKVSLQGIALTNAEVLIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD
ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYVPKALDLIKIKEFTSTNNVKG
KGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTDFTGKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTV
DSTTSTKASSTPVKEVEPDLSALKTLDVAGSIIIDKFKANNAKMQNVTSVFSVNRGVLKLTKFHSDLYSGGIDMTATLDA
RKSVPTYSVKQTIKGVKVAPLLTDVMGESLVEGTGNIAINASGKSLKPTALKQNLKGKVSINFADGAVNGINIPLLIRTT
YAKIKGEKVKGSEEAEKTDFSALTADFYLANGNATTKNIKMVSPLLRIHGEGSAHYVNETANMLIKTSIVGTLKGQGGKD
IDDLKDVTIPIRVTGSWTNPKYKLEFDDVMKQKAQKEIDRGIEKLEEKYGDKIKDEKVKDAANKLLKGLFN
>Mature_711_residues
MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPSIGFSIGKMALSNPEGFVEPN
LVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKNGVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATS
TEFNGWKVSLQGIALTNAEVLIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD
ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYVPKALDLIKIKEFTSTNNVKG
KGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTDFTGKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTV
DSTTSTKASSTPVKEVEPDLSALKTLDVAGSIIIDKFKANNAKMQNVTSVFSVNRGVLKLTKFHSDLYSGGIDMTATLDA
RKSVPTYSVKQTIKGVKVAPLLTDVMGESLVEGTGNIAINASGKSLKPTALKQNLKGKVSINFADGAVNGINIPLLIRTT
YAKIKGEKVKGSEEAEKTDFSALTADFYLANGNATTKNIKMVSPLLRIHGEGSAHYVNETANMLIKTSIVGTLKGQGGKD
IDDLKDVTIPIRVTGSWTNPKYKLEFDDVMKQKAQKEIDRGIEKLEEKYGDKIKDEKVKDAANKLLKGLFN

Specific function: Involved in the inhibition of assembly of mutant ompF proteins. In general, could be involved in the assembly of outer membrane proteins [H]

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788378, Length=398, Percent_Identity=22.8643216080402, Blast_Score=120, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007844 [H]

Pfam domain/function: PF05170 AsmA [H]

EC number: NA

Molecular weight: Translated: 77169; Mature: 77169

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: PS00589 PTS_HPR_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS
CCEEEEEEECHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCEEEEECCEEEEEECC
IGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKN
CCCCHHHHEECCCCCCCCCCEEECCCEEEEECCCHHHHCCCEEEEEEECCCCEEHHHHHC
GVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATSTEFNGWKVSLQGIALTNAEV
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEE
LIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD
EEEECCCCCEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHCCC
ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYV
CCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEECCCCEEEEEC
PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTDFT
CCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
GKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTVDSTTSTKASSTPVKEVEPDL
EEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH
SALKTLDVAGSIIIDKFKANNAKMQNVTSVFSVNRGVLKLTKFHSDLYSGGIDMTATLDA
HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEEEEECC
RKSVPTYSVKQTIKGVKVAPLLTDVMGESLVEGTGNIAINASGKSLKPTALKQNLKGKVS
CCCCCCHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEE
INFADGAVNGINIPLLIRTTYAKIKGEKVKGSEEAEKTDFSALTADFYLANGNATTKNIK
EEEECCCCCCCEEEEEEEEEEHEECCCCCCCCCHHHHCCHHEEEEEEEEECCCCCCCHHH
MVSPLLRIHGEGSAHYVNETANMLIKTSIVGTLKGQGGKDIDDLKDVTIPIRVTGSWTNP
HHHHHHHCCCCCCEEEECHHHCEEEEEEEEEEECCCCCCCHHHHCCCEEEEEEEECCCCC
KYKLEFDDVMKQKAQKEIDRGIEKLEEKYGDKIKDEKVKDAANKLLKGLFN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKIALLISIPFIAVIGAVLVLVLLVNPNEFKPLITEQVEAQTGRQLTIDGDIEWRFFPS
CCEEEEEEECHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCEEEEECCEEEEEECC
IGFSIGKMALSNPEGFVEPNLVSFDNAILDLNVRPLFQQEVSIGLITLDGASFTLHTLKN
CCCCHHHHEECCCCCCCCCCEEECCCEEEEECCCHHHHCCCEEEEEEECCCCEEHHHHHC
GVTNLDGLVAKKETSTVENNNPTAPAEETDVNPEASSATSTEFNGWKVSLQGIALTNAEV
CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCEE
LIQDDKAGSKIHFSDMNLSLSQFIPGQWAKLNFDLKGDLGKQKVALKGKTELNIAETLDD
EEEECCCCCEEEEECCCCCHHHCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHCCC
ASFKNVEFNASYADAVNKFNDITFTIDQFSFDKWANLVLKVKGKANNLEVNSNSTFALYV
CCCCCEEECCHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCEEEECCCCEEEEEC
PKALDLIKIKEFTSTNNVKGKGIPNEDVTAVIGFNSSFALNKSFLKIDKLALSAVDTDFT
CCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCC
GKLSVQLNDIPKVRFDLRSPSIDVDALLATLPKDESSKTVDSTTSTKASSTPVKEVEPDL
EEEEEEECCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCH
SALKTLDVAGSIIIDKFKANNAKMQNVTSVFSVNRGVLKLTKFHSDLYSGGIDMTATLDA
HHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCCEEEEECC
RKSVPTYSVKQTIKGVKVAPLLTDVMGESLVEGTGNIAINASGKSLKPTALKQNLKGKVS
CCCCCCHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCEEE
INFADGAVNGINIPLLIRTTYAKIKGEKVKGSEEAEKTDFSALTADFYLANGNATTKNIK
EEEECCCCCCCEEEEEEEEEEHEECCCCCCCCCHHHHCCHHEEEEEEEEECCCCCCCHHH
MVSPLLRIHGEGSAHYVNETANMLIKTSIVGTLKGQGGKDIDDLKDVTIPIRVTGSWTNP
HHHHHHHCCCCCCEEEECHHHCEEEEEEEEEEECCCCCCCHHHHCCCEEEEEEEECCCCC
KYKLEFDDVMKQKAQKEIDRGIEKLEEKYGDKIKDEKVKDAANKLLKGLFN
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7476172; 9097040; 9278503; 1324907 [H]