| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 59712338
Identifier: 59712338
GI number: 59712338
Start: 1955033
End: 1955662
Strand: Direct
Name: 59712338
Synonym: VF_1731
Alternate gene names: NA
Gene position: 1955033-1955662 (Clockwise)
Preceding gene: 172087725
Following gene: 59712353
Centisome position: 67.47
GC content: 34.92
Gene sequence:
>630_bases ATGACTACACTCTACTCTTTTCGACGTTGCCCCTATGCCATGCGCGCACGACTTGGCATAGTTCAATCAAACAAAACCGT GCATCTTCGTGAGATTATATTAAAAAGCAAACCTGAAGCGATGCTTCAAGCCTCACCTAAAGGCACTGTACCTGTATTAA TTACCAATAAGGGTAAAGTTATCGATGAGAGCTTAGATATTATGAAATGGGCACTAGAAGGCTCTGAGCTATTGCTATCA GCAACAAACGAGATGTTTCAATTGATTCGAGAGAACGATGATATTTTCAAAAGTTGGTTAGATAAATATAAGTACGCTGA TCGCTACCCTGAATACTCTGAAATTTACTACCGAGAACAAGGTGAGCTGTTTTTAAATAAATTAGAACAAAGACTAACGA CTTCACCGATGCTTTTCTCTAAACAATACAGTTTTGCAGATTTAGCTATTCTTCCATTTATTCGTCAATTTGCTTTTGTT GATATTCATTGGTTTTACCAGAGTAAATATAAAAATTTACAGCGTTGGTTATTTGAGTTTATAGAATCAGAACTGTTTAA TTCAATAATGAATAAATACCCTACATGGTTAGATTCACACCAAGAATTTATCTTTCCAGAACAAAAATAA
Upstream 100 bases:
>100_bases ACTAGAAACTAGAAACTAGAAACTAGAAACTAGAAAATGCTAACCTTAAAGCAGATCTTCGGATCTGCTTTTTTATACCG TTCTGATAATGGATTAAATC
Downstream 100 bases:
>100_bases AAAAAGGAGACCAATTGGCCTCCTTTTTTATTCTTTCAATGATGAATTAATTGTTGCTAATCCACTCATTCATGTCTGTT TTAAGGTTATCAGACTTAGT
Product: stringent starvation protein A
Products: NA
Alternate protein names: Glutathione S-Transferase; Glutathione S-Transferase Domain Protein; Glutathione S-Transferase-Like Protein; Glutathione S-Transferase N Terminus; Glutathione S-Transferase N-Terminal Domain; Glutaredoxin; Glutathione-S-Transferase Domain-Containing Protein; Rhodanese Domain Protein; Glutathione S-Transferase-Like; Glutathione S-Transferase Family Protein; Glutathione S-Transferase C-Terminal-Like Domain; Glutathione S-Transferase Domain; Glutathione-S-Transferase Domain Protein; Glutathione S-Transferase Omega Class; Rhodanese Domain-Containing Protein; Glutathione S-Transferase N-Terminal Domain Protein; Stringent Starvation Protein A; Glutathione S-Transferase N Terminal Domain Protein; GSH-Dependent Dehydroascorbate Reductase; Glutathione S-Transferase C-Terminal Domain Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTTLYSFRRCPYAMRARLGIVQSNKTVHLREIILKSKPEAMLQASPKGTVPVLITNKGKVIDESLDIMKWALEGSELLLS ATNEMFQLIRENDDIFKSWLDKYKYADRYPEYSEIYYREQGELFLNKLEQRLTTSPMLFSKQYSFADLAILPFIRQFAFV DIHWFYQSKYKNLQRWLFEFIESELFNSIMNKYPTWLDSHQEFIFPEQK
Sequences:
>Translated_209_residues MTTLYSFRRCPYAMRARLGIVQSNKTVHLREIILKSKPEAMLQASPKGTVPVLITNKGKVIDESLDIMKWALEGSELLLS ATNEMFQLIRENDDIFKSWLDKYKYADRYPEYSEIYYREQGELFLNKLEQRLTTSPMLFSKQYSFADLAILPFIRQFAFV DIHWFYQSKYKNLQRWLFEFIESELFNSIMNKYPTWLDSHQEFIFPEQK >Mature_208_residues TTLYSFRRCPYAMRARLGIVQSNKTVHLREIILKSKPEAMLQASPKGTVPVLITNKGKVIDESLDIMKWALEGSELLLSA TNEMFQLIRENDDIFKSWLDKYKYADRYPEYSEIYYREQGELFLNKLEQRLTTSPMLFSKQYSFADLAILPFIRQFAFVD IHWFYQSKYKNLQRWLFEFIESELFNSIMNKYPTWLDSHQEFIFPEQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25051; Mature: 24920
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLYSFRRCPYAMRARLGIVQSNKTVHLREIILKSKPEAMLQASPKGTVPVLITNKGKV CCCCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC IDESLDIMKWALEGSELLLSATNEMFQLIRENDDIFKSWLDKYKYADRYPEYSEIYYREQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC GELFLNKLEQRLTTSPMLFSKQYSFADLAILPFIRQFAFVDIHWFYQSKYKNLQRWLFEF HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IESELFNSIMNKYPTWLDSHQEFIFPEQK HHHHHHHHHHHHCCCHHCCCCCCCCCCCC >Mature Secondary Structure TTLYSFRRCPYAMRARLGIVQSNKTVHLREIILKSKPEAMLQASPKGTVPVLITNKGKV CCCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHCCCCCCCEEEEECCCCCC IDESLDIMKWALEGSELLLSATNEMFQLIRENDDIFKSWLDKYKYADRYPEYSEIYYREQ HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC GELFLNKLEQRLTTSPMLFSKQYSFADLAILPFIRQFAFVDIHWFYQSKYKNLQRWLFEF HHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IESELFNSIMNKYPTWLDSHQEFIFPEQK HHHHHHHHHHHHCCCHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA