| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712330
Identifier: 59712330
GI number: 59712330
Start: 1942711
End: 1943418
Strand: Reverse
Name: 59712330
Synonym: VF_1723
Alternate gene names: NA
Gene position: 1943418-1942711 (Counterclockwise)
Preceding gene: 59712334
Following gene: 172087723
Centisome position: 67.07
GC content: 36.58
Gene sequence:
>708_bases ATGTTATTTCAAACTATGCAATATATCCTTATTCCTGCTTTGCTTGGTGCTCAAATTATTTTGACCATTATTTTGCATAA AGGGGATATTTGCCCAGGTCAACGTGGTCGCGTACATAAGTGGTTGCCTGCTCTAATTTTAGGTTGGTGTGCGATTGCTG GTTTTGGTATGACTTACGCACCGATATTTGCAATGAATTTTATTCCTGCAATCGCAATTACTGGTTTTTATTTAAGTGTA AAAACGGGTAAAACACGAGACAAAGGGCCATTAATTGTTTTGGCATTAGCCAATGGTTTTGCTGCTGCAAGTTTTGTTAA TTTAGCGCTTGGTTCAGGTTCATTTACGCAATTATTTTATGCGTTAGTTGGTCCATTTATTTTTGGTGCTCTACTTGCTC ATTTGCTTTTAGCTCTTGCTCGTACTCGTCTGCAAGCATTCCATAAAATTTTACCAATTAGTGGTATCGTTGGCGGTATC ATTATGGCTGTGATTTTACTTTGCCAAACACTAAGTGTTCATGAGATTTTTCTAGATCGTATGGCAGTGAAGTTAGCCAT TGCTTTAGGTTTGATGCTATTAAGTATTGGTTTTTGGACTTATCACTTGTTTAAACAACAGGCGATCAAGTGGCAATTTT TACTAATAGCGAACGTTATTATGGCTATTTCTGGTTATTATCAGTTTCAGTTGTTTTTTGTGAGATAG
Upstream 100 bases:
>100_bases GAGATCTTAATAAGAATAGGTTGTTTTTTAACCGTGACTAGACGAAGGGAAAATAGCGTTTATACTAGTCTGATTCAAAT TCCGTAAATAGAACTTCATT
Downstream 100 bases:
>100_bases AGCAAACATTCTGTTCGAAAATTGGTCTACTCTAAGTTTGTCTCTTAAGCAACATGGAGGGTATAGATTGGATTTAAGCA ATGCACATGGCCTAGAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MLFQTMQYILIPALLGAQIILTIILHKGDICPGQRGRVHKWLPALILGWCAIAGFGMTYAPIFAMNFIPAIAITGFYLSV KTGKTRDKGPLIVLALANGFAAASFVNLALGSGSFTQLFYALVGPFIFGALLAHLLLALARTRLQAFHKILPISGIVGGI IMAVILLCQTLSVHEIFLDRMAVKLAIALGLMLLSIGFWTYHLFKQQAIKWQFLLIANVIMAISGYYQFQLFFVR
Sequences:
>Translated_235_residues MLFQTMQYILIPALLGAQIILTIILHKGDICPGQRGRVHKWLPALILGWCAIAGFGMTYAPIFAMNFIPAIAITGFYLSV KTGKTRDKGPLIVLALANGFAAASFVNLALGSGSFTQLFYALVGPFIFGALLAHLLLALARTRLQAFHKILPISGIVGGI IMAVILLCQTLSVHEIFLDRMAVKLAIALGLMLLSIGFWTYHLFKQQAIKWQFLLIANVIMAISGYYQFQLFFVR >Mature_235_residues MLFQTMQYILIPALLGAQIILTIILHKGDICPGQRGRVHKWLPALILGWCAIAGFGMTYAPIFAMNFIPAIAITGFYLSV KTGKTRDKGPLIVLALANGFAAASFVNLALGSGSFTQLFYALVGPFIFGALLAHLLLALARTRLQAFHKILPISGIVGGI IMAVILLCQTLSVHEIFLDRMAVKLAIALGLMLLSIGFWTYHLFKQQAIKWQFLLIANVIMAISGYYQFQLFFVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25831; Mature: 25831
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFQTMQYILIPALLGAQIILTIILHKGDICPGQRGRVHKWLPALILGWCAIAGFGMTYA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH PIFAMNFIPAIAITGFYLSVKTGKTRDKGPLIVLALANGFAAASFVNLALGSGSFTQLFY HHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHH ALVGPFIFGALLAHLLLALARTRLQAFHKILPISGIVGGIIMAVILLCQTLSVHEIFLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVKLAIALGLMLLSIGFWTYHLFKQQAIKWQFLLIANVIMAISGYYQFQLFFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC >Mature Secondary Structure MLFQTMQYILIPALLGAQIILTIILHKGDICPGQRGRVHKWLPALILGWCAIAGFGMTYA CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHH PIFAMNFIPAIAITGFYLSVKTGKTRDKGPLIVLALANGFAAASFVNLALGSGSFTQLFY HHHHHHHHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCHHHHHHH ALVGPFIFGALLAHLLLALARTRLQAFHKILPISGIVGGIIMAVILLCQTLSVHEIFLDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAVKLAIALGLMLLSIGFWTYHLFKQQAIKWQFLLIANVIMAISGYYQFQLFFVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA