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The map label for this gene is accD

Identifier: 59712302

GI number: 59712302

Start: 1907637

End: 1908521

Strand: Reverse

Name: accD

Synonym: VF_1695

Alternate gene names: 59712302

Gene position: 1908521-1907637 (Counterclockwise)

Preceding gene: 172087721

Following gene: 59712301

Centisome position: 65.87

GC content: 40.56

Gene sequence:

>885_bases
ATGAGTTGGCTTGAAAAGATTTTTAATACAAGCAATATTGTTAGTTCACGTAAAGCATCGATCCCTGAAGGGGTTTGGAC
GAAATGTACGTCATGTGAACAAGTTCTTTATTCTGCAGAATTAGAGCGTAACCTAGAAGTGTGTCCAAAATGTGACCACC
ATATGCGAATGAAAGCTCGTAAGCGTCTTGAAACATTCTTAGATGCAGAAGGTCGTGTTGAAATTGGTGCTGAATTAGAA
CCAAAAGATGTTTTAAAGTTTAAAGATTCAAAACGTTATAAAGATCGTATCTCTGCTGCACAGAAATCAAGTGAAGAAAC
AGATGCTCTAGTGGTAATGAAAGGTACTCTATTAGAATTACCTGTTGTTGCATGTGCATTTGAATTCTCATTTATGGGTG
GTTCAATGGGTTCTGTTGTTGGCGCTCGCTTTGTTAAAGCGGTAGATGCAGCAATTGAAAATAATTGTCCTCTTGTATGT
TTCTCTGCAAGTGGTGGTGCACGTATGCAAGAGGCGCTTATGTCTCTAATGCAAATGGCAAAAACAAGTGCAGCTCTAGC
TCGTTTGTCTCGTAAAGGCCTACCATTTTTCTCTGTACTAACTGACCCAACAATGGGTGGTGTATCAGCAAGTTTAGCAA
TGCTAGGTGATATCAATATCGGTGAACCAAAAGCGTTAATCGGCTTTGCTGGTCGTCGTGTTATTGAGCAAACTGTGCGT
GAAGATCTTCCTGAAGGTTTCCAACGTAGTGAATTCTTGCTTGAGCATGGTGCGATTGACATGATTGTTGACCGTCGTGA
AATGCGTCAACGTATCGGTGGGTTAATGGCTAAAATGACGAATCAAGAGTCACCATTAGTTGTTCCTGTTGATGGTTCAC
ACTAA

Upstream 100 bases:

>100_bases
AGTTTTTTATCTACACTGGCGGATATTTATGGTTTAATCTATTTAATTGAATTTTATTCTCTTGCGATGGTGCGAGAGAT
CACTAATAGAAAGGTCGTCC

Downstream 100 bases:

>100_bases
GAATTAAATCAAATGGGACCAAGGTTGTTAGTTCTTACTTTAAAACAGCAACCTAAGTCATATATACTGTCACTATATTC
GTTAGTGAAGTAGTTGAATT

Product: acetyl-CoA carboxylase subunit beta

Products: NA

Alternate protein names: ACCase subunit beta; Acetyl-CoA carboxylase carboxyltransferase subunit beta

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVEIGAELE
PKDVLKFKDSKRYKDRISAAQKSSEETDALVVMKGTLLELPVVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVC
FSASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQESPLVVPVDGSH

Sequences:

>Translated_294_residues
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVEIGAELE
PKDVLKFKDSKRYKDRISAAQKSSEETDALVVMKGTLLELPVVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVC
FSASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQESPLVVPVDGSH
>Mature_293_residues
SWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKARKRLETFLDAEGRVEIGAELEP
KDVLKFKDSKRYKDRISAAQKSSEETDALVVMKGTLLELPVVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCF
SASGGARMQEALMSLMQMAKTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVRE
DLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQESPLVVPVDGSH

Specific function: Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA

COG id: COG0777

COG function: function code I; Acetyl-CoA carboxylase beta subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AccD/PCCB family

Homologues:

Organism=Escherichia coli, GI1788655, Length=285, Percent_Identity=75.0877192982456, Blast_Score=448, Evalue=1e-127,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ACCD_VIBF1 (Q5E456)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_205078.1
- ProteinModelPortal:   Q5E456
- SMR:   Q5E456
- STRING:   Q5E456
- GeneID:   3277672
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1695
- NMPDR:   fig|312309.3.peg.1695
- eggNOG:   COG0777
- HOGENOM:   HBG285696
- OMA:   LEHGMVD
- PhylomeDB:   Q5E456
- ProtClustDB:   PRK05654
- BioCyc:   VFIS312309:VF1695-MONOMER
- HAMAP:   MF_01395
- InterPro:   IPR000438
- InterPro:   IPR000022
- InterPro:   IPR011762
- PRINTS:   PR01070
- TIGRFAMs:   TIGR00515

Pfam domain/function: PF01039 Carboxyl_trans

EC number: =6.4.1.2

Molecular weight: Translated: 32317; Mature: 32186

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS50980 COA_CT_NTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKAR
CCHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KRLETFLDAEGRVEIGAELEPKDVLKFKDSKRYKDRISAAQKSSEETDALVVMKGTLLEL
HHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHH
PVVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCFSASGGARMQEALMSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
HHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQESPLVVPVDGSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
>Mature Secondary Structure 
SWLEKIFNTSNIVSSRKASIPEGVWTKCTSCEQVLYSAELERNLEVCPKCDHHMRMKAR
CHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
KRLETFLDAEGRVEIGAELEPKDVLKFKDSKRYKDRISAAQKSSEETDALVVMKGTLLEL
HHHHHHHCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHH
PVVACAFEFSFMGGSMGSVVGARFVKAVDAAIENNCPLVCFSASGGARMQEALMSLMQMA
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHH
KTSAALARLSRKGLPFFSVLTDPTMGGVSASLAMLGDINIGEPKALIGFAGRRVIEQTVR
HHHHHHHHHHHCCCCEEHHHCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
EDLPEGFQRSEFLLEHGAIDMIVDRREMRQRIGGLMAKMTNQESPLVVPVDGSH
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA