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The map label for this gene is yfiP [H]

Identifier: 59712290

GI number: 59712290

Start: 1895655

End: 1896278

Strand: Reverse

Name: yfiP [H]

Synonym: VF_1683

Alternate gene names: 59712290

Gene position: 1896278-1895655 (Counterclockwise)

Preceding gene: 59712292

Following gene: 59712288

Centisome position: 65.44

GC content: 35.1

Gene sequence:

>624_bases
GTGATTCGATTTTGTCTTCAATGTTTAAAAACAAAAAAAGCCTGTATATGTGAGTGGATCACACCCATTACCACGGATAT
TGAATTAATCATACTACAGCATCCAACAGAAGCTAAGCGCCCATTAGGAACAGCGAAAATTTTATCTTTAAGTTTGGTGA
ATTGTCGTACTTTTATCGGTGAGAATTTTTCAGAACATTCTGAGTTAAACCAATTATTAGCTGACGATAGCTATCATCAT
CAAGTGTTGTTTTTAGATAATGAAAGCAAAGCTATTGGTACAGATAAAGCTCTTCTTCAAAAGAAACAACGCGTTATTCT
ATTAGATGGTACGTGGAAAAAAGCATATAAAATGTGGCAGTTATCCACCAATTTGCATTCCTTACCTAAGGTGCATTTAA
ACACCGATTTATCTGGTAATTATCGAGTTCGTAAAGCGCCAAAAGACAATGCATTATCAACAGCGGAAGCGGGATACCAC
ATTTTAACTCAGCTAGATAATGATTGTGTGGCGTCAAATAATGTTGAAAAATTTGATTCGATTTTAACGGCATTTGATAA
CATGATTGAGTTTCATATTAGCCAAATGCCAGAAGGTGTATTTGAGAAGAACTACCGTTCATAG

Upstream 100 bases:

>100_bases
ATAGCGATCCCATACCAATATATCCGATACCATACTAAATTGAGCAATACCAAGCCCAATCAGAATGGGAAGTAATAATT
TAAACAAGTAAAGGTTCCTT

Downstream 100 bases:

>100_bases
CTTGTAATATACCAATCCAAGTAAGTAAATATTAATACTTATTTGAATTGGTATTGATTCTTAAATCGGAACAAAGAGTT
GATTATATAAACGCTGAGCA

Product: putative cytoplasmic protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIRFCLQCLKTKKACICEWITPITTDIELIILQHPTEAKRPLGTAKILSLSLVNCRTFIGENFSEHSELNQLLADDSYHH
QVLFLDNESKAIGTDKALLQKKQRVILLDGTWKKAYKMWQLSTNLHSLPKVHLNTDLSGNYRVRKAPKDNALSTAEAGYH
ILTQLDNDCVASNNVEKFDSILTAFDNMIEFHISQMPEGVFEKNYRS

Sequences:

>Translated_207_residues
MIRFCLQCLKTKKACICEWITPITTDIELIILQHPTEAKRPLGTAKILSLSLVNCRTFIGENFSEHSELNQLLADDSYHH
QVLFLDNESKAIGTDKALLQKKQRVILLDGTWKKAYKMWQLSTNLHSLPKVHLNTDLSGNYRVRKAPKDNALSTAEAGYH
ILTQLDNDCVASNNVEKFDSILTAFDNMIEFHISQMPEGVFEKNYRS
>Mature_207_residues
MIRFCLQCLKTKKACICEWITPITTDIELIILQHPTEAKRPLGTAKILSLSLVNCRTFIGENFSEHSELNQLLADDSYHH
QVLFLDNESKAIGTDKALLQKKQRVILLDGTWKKAYKMWQLSTNLHSLPKVHLNTDLSGNYRVRKAPKDNALSTAEAGYH
ILTQLDNDCVASNNVEKFDSILTAFDNMIEFHISQMPEGVFEKNYRS

Specific function: Unknown

COG id: COG3148

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTW family [H]

Homologues:

Organism=Homo sapiens, GI27734779, Length=171, Percent_Identity=27.4853801169591, Blast_Score=69, Evalue=4e-12,
Organism=Escherichia coli, GI87082133, Length=188, Percent_Identity=27.6595744680851, Blast_Score=79, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358337, Length=171, Percent_Identity=29.8245614035088, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005636 [H]

Pfam domain/function: PF03942 DTW [H]

EC number: NA

Molecular weight: Translated: 23623; Mature: 23623

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFCLQCLKTKKACICEWITPITTDIELIILQHPTEAKRPLGTAKILSLSLVNCRTFIG
CHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHC
ENFSEHSELNQLLADDSYHHQVLFLDNESKAIGTDKALLQKKQRVILLDGTWKKAYKMWQ
CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHH
LSTNLHSLPKVHLNTDLSGNYRVRKAPKDNALSTAEAGYHILTQLDNDCVASNNVEKFDS
HHCCHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHCCHHEEHHCCCCCCCCCCHHHHHH
ILTAFDNMIEFHISQMPEGVFEKNYRS
HHHHHHHHHHHHHHHCCHHHHHCCCCC
>Mature Secondary Structure
MIRFCLQCLKTKKACICEWITPITTDIELIILQHPTEAKRPLGTAKILSLSLVNCRTFIG
CHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHHHHHHC
ENFSEHSELNQLLADDSYHHQVLFLDNESKAIGTDKALLQKKQRVILLDGTWKKAYKMWQ
CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCHHHHHHHHH
LSTNLHSLPKVHLNTDLSGNYRVRKAPKDNALSTAEAGYHILTQLDNDCVASNNVEKFDS
HHCCHHHCCEEEECCCCCCCEEEEECCCCCCCCHHHCCHHEEHHCCCCCCCCCCHHHHHH
ILTAFDNMIEFHISQMPEGVFEKNYRS
HHHHHHHHHHHHHHHCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]