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The map label for this gene is torT [H]

Identifier: 59712227

GI number: 59712227

Start: 1818057

End: 1819055

Strand: Direct

Name: torT [H]

Synonym: VF_1620

Alternate gene names: 59712227

Gene position: 1818057-1819055 (Clockwise)

Preceding gene: 59712224

Following gene: 59712228

Centisome position: 62.74

GC content: 38.74

Gene sequence:

>999_bases
ATGAAGCTTACTTTTCATCTTATATACATTATTTTATTCTCTGTCTTTTTATCGCCTCTTGCCCACGCAAAAACACCTTG
GAAATTGTGTGCAATCTACCCACATTTAAAAGACTCTTACTGGTTATCTGTTAACTATGGAATGGTAAAAGAAGCTAAAG
CTCAGCATGTTGAATTAACCGTCTATGAATCTGGTGGTTATCCTAATGTTGAACGACAAACTCAACAAATCGAGCAATGT
GTATTGAATGGTTCTGATGCAATCATTTTAGGTACCGTTGATCCTATGGCTTTTCAAGCTAACCTTATTACGCTTACAAA
AGGCATACCTGTTTTTGCTACCGTAAATCAACTAATTAGTTCCTATCCTCCAGCCACCCCAGTTCATCATGGTGAAGTCG
GTGTTGATTGGTATGAAATGGGCTATAAAACTGGTGAATTTTTAGCTAAAAGACACCCAAAGGATTCTGGTATCACTTAT
ATTGGCTGGCTCCCTGGTCCTAAAACTAGAGGTGGAACAAAACCCGTCACCCAAGGTTTTAATGATGCGATTAAAGACAG
CGATATTATCGTCAGTGCAACGTACTGGGGTGATAACAGTAAGGAATTACAACGCAACTTAATTCAAGATGCTTTGCAAA
CAGAAAAATTGGATTATTTGGTTGGAGGTGCTGTCGCAATTGAGGTGGCAATCAGTGAAGTCGCAAGCCGAAAAATGCAA
AATCAAGTGGGTTTAGTCTCTACTTACTTAAGTCATGCAGTATATCGCGGTTTATTACGTAATCGCGTGTTATTCTCCCC
CACTGATAAAATGGTATTACAGGGACAGCTGAGTATTCAACAAGCGGTGAGTTATCTTAATAAACACCCACTGTCTTTTC
AGTTATCACCAAAAATTGAAGCATTAACACCGCAGCATTTACCAAAAAAAGTTCTCGAAGAATCACTCTCACCTGCAGAG
TATCGTCCTACTTTTTTCGTATCAGCTGAAAAACAATAA

Upstream 100 bases:

>100_bases
ACCGATCCCTGTAGAAGCAAATAACATAATATTGAAACACTTTGGAAAAAGAAGTAATGCGGGTATCATATCACCAACCT
AAAGCCAGTGCGAAGATACC

Downstream 100 bases:

>100_bases
TTAAAACAACGCTTATATATTGTCATAAAATTGAGGTATAGACGTTGTACCCTCTACAAATTGTACCCTGCTATAAAATA
GGAATAAGGAATATCAATGA

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MKLTFHLIYIILFSVFLSPLAHAKTPWKLCAIYPHLKDSYWLSVNYGMVKEAKAQHVELTVYESGGYPNVERQTQQIEQC
VLNGSDAIILGTVDPMAFQANLITLTKGIPVFATVNQLISSYPPATPVHHGEVGVDWYEMGYKTGEFLAKRHPKDSGITY
IGWLPGPKTRGGTKPVTQGFNDAIKDSDIIVSATYWGDNSKELQRNLIQDALQTEKLDYLVGGAVAIEVAISEVASRKMQ
NQVGLVSTYLSHAVYRGLLRNRVLFSPTDKMVLQGQLSIQQAVSYLNKHPLSFQLSPKIEALTPQHLPKKVLEESLSPAE
YRPTFFVSAEKQ

Sequences:

>Translated_332_residues
MKLTFHLIYIILFSVFLSPLAHAKTPWKLCAIYPHLKDSYWLSVNYGMVKEAKAQHVELTVYESGGYPNVERQTQQIEQC
VLNGSDAIILGTVDPMAFQANLITLTKGIPVFATVNQLISSYPPATPVHHGEVGVDWYEMGYKTGEFLAKRHPKDSGITY
IGWLPGPKTRGGTKPVTQGFNDAIKDSDIIVSATYWGDNSKELQRNLIQDALQTEKLDYLVGGAVAIEVAISEVASRKMQ
NQVGLVSTYLSHAVYRGLLRNRVLFSPTDKMVLQGQLSIQQAVSYLNKHPLSFQLSPKIEALTPQHLPKKVLEESLSPAE
YRPTFFVSAEKQ
>Mature_332_residues
MKLTFHLIYIILFSVFLSPLAHAKTPWKLCAIYPHLKDSYWLSVNYGMVKEAKAQHVELTVYESGGYPNVERQTQQIEQC
VLNGSDAIILGTVDPMAFQANLITLTKGIPVFATVNQLISSYPPATPVHHGEVGVDWYEMGYKTGEFLAKRHPKDSGITY
IGWLPGPKTRGGTKPVTQGFNDAIKDSDIIVSATYWGDNSKELQRNLIQDALQTEKLDYLVGGAVAIEVAISEVASRKMQ
NQVGLVSTYLSHAVYRGLLRNRVLFSPTDKMVLQGQLSIQQAVSYLNKHPLSFQLSPKIEALTPQHLPKKVLEESLSPAE
YRPTFFVSAEKQ

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=316, Percent_Identity=39.873417721519, Blast_Score=211, Evalue=7e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37008; Mature: 37008

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTFHLIYIILFSVFLSPLAHAKTPWKLCAIYPHLKDSYWLSVNYGMVKEAKAQHVELT
CEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCHHHHCCCCEEEEE
VYESGGYPNVERQTQQIEQCVLNGSDAIILGTVDPMAFQANLITLTKGIPVFATVNQLIS
EEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHEEEEEEEECCCCHHHHHHHHHH
SYPPATPVHHGEVGVDWYEMGYKTGEFLAKRHPKDSGITYIGWLPGPKTRGGTKPVTQGF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCC
NDAIKDSDIIVSATYWGDNSKELQRNLIQDALQTEKLDYLVGGAVAIEVAISEVASRKMQ
HHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NQVGLVSTYLSHAVYRGLLRNRVLFSPTDKMVLQGQLSIQQAVSYLNKHPLSFQLSPKIE
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCC
ALTPQHLPKKVLEESLSPAEYRPTFFVSAEKQ
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCC
>Mature Secondary Structure
MKLTFHLIYIILFSVFLSPLAHAKTPWKLCAIYPHLKDSYWLSVNYGMVKEAKAQHVELT
CEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCHHHHCCCCEEEEE
VYESGGYPNVERQTQQIEQCVLNGSDAIILGTVDPMAFQANLITLTKGIPVFATVNQLIS
EEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHEEEEEEEECCCCHHHHHHHHHH
SYPPATPVHHGEVGVDWYEMGYKTGEFLAKRHPKDSGITYIGWLPGPKTRGGTKPVTQGF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHCCC
NDAIKDSDIIVSATYWGDNSKELQRNLIQDALQTEKLDYLVGGAVAIEVAISEVASRKMQ
HHHCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
NQVGLVSTYLSHAVYRGLLRNRVLFSPTDKMVLQGQLSIQQAVSYLNKHPLSFQLSPKIE
HHHHHHHHHHHHHHHHHHHHCCEEECCCCCEEEEHHHHHHHHHHHHHCCCCEEEECCCCC
ALTPQHLPKKVLEESLSPAEYRPTFFVSAEKQ
CCCHHHHHHHHHHHCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]