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The map label for this gene is yccT [C]

Identifier: 59712223

GI number: 59712223

Start: 1812069

End: 1812698

Strand: Direct

Name: yccT [C]

Synonym: VF_1616

Alternate gene names: 59712223

Gene position: 1812069-1812698 (Clockwise)

Preceding gene: 59712222

Following gene: 59712224

Centisome position: 62.54

GC content: 34.13

Gene sequence:

>630_bases
ATGAAAATACAATCTATTTTTGCTGCTAGCTTCTGTCTTCTTTCATCTATTTCAGCACATGCGGCCATTCAATTAACTGT
ACCTGACGAAGTTGAACTGATTCTTGTTGATAACCAAGAAGTAAAGCTTGAGAGCTCATTCTTTTCTACTACATCAACGC
TTGATTTAGAAAATGGTAAACATCAAATTGTTTTTAGATATAACCCTGTATTCAAGCAAGGTAAAGATAACATCATTGTA
TCAAGCGACATCATCGTCTCGACATTTTCTGCAGAAGATAAAGAAATAAGCTTTAAGTTCCCAACCTATAACTCTCCTGA
AAAAGCTAAAGCATTTAATCGCGATCTAAATTGGGAGTTAATAGATAAAAACAATAATAGTATTCCTTTCGCTCAGTCAC
AATTGATCTACAACGGAATGCAAGTTGGTCGAAATATTCAATTCGAAGTCGCAAAATTTAATACTACAGAGCACCCTGCT
GCCTTTAAAGAAGGTATGGTTACCGTAACTCATAAAGAAATTAAAAATGAGCAAGGTGATAATACAGCAGAACAAATGCT
GCATTATTGGTATGAGAAAGCCGATCAAGCTACAAAAGAACGCTTCTTAAAATCAATTACTAATAAGTAA

Upstream 100 bases:

>100_bases
AAATTCTAACTTTCTCCCGACATAACAAGTTGTTTGGATCATTTCATTCCATTTAAAATATGAGTACACTTGTTTTAATT
ATTACAACAGGTGTACTCCT

Downstream 100 bases:

>100_bases
ATTTATCCACATCAAAGGAATTGTATGGGTAAAAATGGACTTGGATTTACCTTAATCGAACTCGTTATTGCGATTACTGT
TGCGGCAGTAATTGCAATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKIQSIFAASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGKHQIVFRYNPVFKQGKDNIIV
SSDIIVSTFSAEDKEISFKFPTYNSPEKAKAFNRDLNWELIDKNNNSIPFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPA
AFKEGMVTVTHKEIKNEQGDNTAEQMLHYWYEKADQATKERFLKSITNK

Sequences:

>Translated_209_residues
MKIQSIFAASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGKHQIVFRYNPVFKQGKDNIIV
SSDIIVSTFSAEDKEISFKFPTYNSPEKAKAFNRDLNWELIDKNNNSIPFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPA
AFKEGMVTVTHKEIKNEQGDNTAEQMLHYWYEKADQATKERFLKSITNK
>Mature_209_residues
MKIQSIFAASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGKHQIVFRYNPVFKQGKDNIIV
SSDIIVSTFSAEDKEISFKFPTYNSPEKAKAFNRDLNWELIDKNNNSIPFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPA
AFKEGMVTVTHKEIKNEQGDNTAEQMLHYWYEKADQATKERFLKSITNK

Specific function: Unknown

COG id: COG3110

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0319 family

Homologues:

Organism=Escherichia coli, GI1787198, Length=207, Percent_Identity=23.1884057971014, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1616_VIBF1 (Q5E4D5)

Other databases:

- EMBL:   CP000020
- RefSeq:   YP_204999.1
- STRING:   Q5E4D5
- GeneID:   3278920
- GenomeReviews:   CP000020_GR
- KEGG:   vfi:VF_1616
- NMPDR:   fig|312309.3.peg.1616
- eggNOG:   COG3110
- HOGENOM:   HBG625766
- OMA:   FEHEILQ
- PhylomeDB:   Q5E4D5
- ProtClustDB:   CLSK2396169
- BioCyc:   VFIS312309:VF1616-MONOMER
- HAMAP:   MF_00789
- InterPro:   IPR018635

Pfam domain/function: PF09829 DUF2057

EC number: NA

Molecular weight: Translated: 23826; Mature: 23826

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQSIFAASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGK
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEHHHCCCCEEEEECCCC
HQIVFRYNPVFKQGKDNIIVSSDIIVSTFSAEDKEISFKFPTYNSPEKAKAFNRDLNWEL
EEEEEEECCHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCEEE
IDKNNNSIPFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPAAFKEGMVTVTHKEIKNEQGD
EECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHCCEEEEEHHHHCCCCCC
NTAEQMLHYWYEKADQATKERFLKSITNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIQSIFAASFCLLSSISAHAAIQLTVPDEVELILVDNQEVKLESSFFSTTSTLDLENGK
CCCHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCEEEEHHHCCCCEEEEECCCC
HQIVFRYNPVFKQGKDNIIVSSDIIVSTFSAEDKEISFKFPTYNSPEKAKAFNRDLNWEL
EEEEEEECCHHHCCCCCEEEECCEEEEEECCCCCEEEEECCCCCCCHHHHHHCCCCCEEE
IDKNNNSIPFAQSQLIYNGMQVGRNIQFEVAKFNTTEHPAAFKEGMVTVTHKEIKNEQGD
EECCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHCCEEEEEHHHHCCCCCC
NTAEQMLHYWYEKADQATKERFLKSITNK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA