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The map label for this gene is ybaY [H]

Identifier: 59712183

GI number: 59712183

Start: 1764352

End: 1764807

Strand: Reverse

Name: ybaY [H]

Synonym: VF_1576

Alternate gene names: 59712183

Gene position: 1764807-1764352 (Counterclockwise)

Preceding gene: 59712185

Following gene: 59712181

Centisome position: 60.91

GC content: 40.57

Gene sequence:

>456_bases
ATGGTCGGTTGCAATTCATCTGATAAATCAGAAAAAGAAACAACAGCTGCACCACAACAAGAAGTGGTTGAGCAAGTGGA
AGTTGTTGAGACAGAAGTAGCACCAGTAGAAGCAGCTGCAACGCAAGCAGTTACTGGTACAGTAGGCTACCGTGAGCGTA
TTGCATTACCTGCAAATGCGGTTGTAACTGTTACTTTAGAGGATGTTTCTTTAGCTGATGCACCATCGAAAACTATCACA
GAGCAAACGTTTGAAGTAGGTGAAAATTCATCTCCATTCGCTTACTCTTTAGAGTTTAATACTGCAGATATTCAAGCTAA
TCACCGCTATGCAGTACGTGCAACAATTAAAGTTGATGGTAAATTACGTTTTACTACAGACACGAACTATGCAGTAATTA
CTGATGAAGCAACAACGCTGAATCAAGACCTATTACTGAAAGGCGTTCGTCAGTAA

Upstream 100 bases:

>100_bases
TCAGTCTATATTCAGCGTGGTTTTGAATGGCAATTAAATTAGAGAGAATAAAATGAAAAAGTCATTACTAGTAGCTTTAT
CAGTCGTTACAGGATTAACA

Downstream 100 bases:

>100_bases
TTTAACGGTTATTCTTAATTCGAGTAAGTGATACTTATTTGAATAAGTAGAGCAAGTAGTAATGTGAGTTATTGCATTAT
TACTTGCTTAAAATTCATTA

Product: outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVGCNSSDKSEKETTAAPQQEVVEQVEVVETEVAPVEAAATQAVTGTVGYRERIALPANAVVTVTLEDVSLADAPSKTIT
EQTFEVGENSSPFAYSLEFNTADIQANHRYAVRATIKVDGKLRFTTDTNYAVITDEATTLNQDLLLKGVRQ

Sequences:

>Translated_151_residues
MVGCNSSDKSEKETTAAPQQEVVEQVEVVETEVAPVEAAATQAVTGTVGYRERIALPANAVVTVTLEDVSLADAPSKTIT
EQTFEVGENSSPFAYSLEFNTADIQANHRYAVRATIKVDGKLRFTTDTNYAVITDEATTLNQDLLLKGVRQ
>Mature_151_residues
MVGCNSSDKSEKETTAAPQQEVVEQVEVVETEVAPVEAAATQAVTGTVGYRERIALPANAVVTVTLEDVSLADAPSKTIT
EQTFEVGENSSPFAYSLEFNTADIQANHRYAVRATIKVDGKLRFTTDTNYAVITDEATTLNQDLLLKGVRQ

Specific function: Unknown

COG id: COG3126

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786658, Length=108, Percent_Identity=47.2222222222222, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16282; Mature: 16282

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGCNSSDKSEKETTAAPQQEVVEQVEVVETEVAPVEAAATQAVTGTVGYRERIALPANA
CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCEEEECCCCE
VVTVTLEDVSLADAPSKTITEQTFEVGENSSPFAYSLEFNTADIQANHRYAVRATIKVDG
EEEEEEECCEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCEEEECCCEEEEEEEEEECC
KLRFTTDTNYAVITDEATTLNQDLLLKGVRQ
EEEEEECCCEEEEECCCCCCCHHHHHHCCCC
>Mature Secondary Structure
MVGCNSSDKSEKETTAAPQQEVVEQVEVVETEVAPVEAAATQAVTGTVGYRERIALPANA
CCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHEEECCCCCCEEEECCCCE
VVTVTLEDVSLADAPSKTITEQTFEVGENSSPFAYSLEFNTADIQANHRYAVRATIKVDG
EEEEEEECCEECCCCCCHHHHHHHHCCCCCCCEEEEEEECCEEEECCCEEEEEEEEEECC
KLRFTTDTNYAVITDEATTLNQDLLLKGVRQ
EEEEEECCCEEEEECCCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]