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The map label for this gene is aapJ [H]

Identifier: 59712139

GI number: 59712139

Start: 1713837

End: 1714865

Strand: Direct

Name: aapJ [H]

Synonym: VF_1532

Alternate gene names: 59712139

Gene position: 1713837-1714865 (Clockwise)

Preceding gene: 59712136

Following gene: 59712140

Centisome position: 59.15

GC content: 40.62

Gene sequence:

>1029_bases
ATGAAATTTAAAACAAATAAACTGTTTGCTGCTATTGCTACTTCTGCGGCACTTTTATCAGCTCCAGCACTCGCTGCAAG
TGGAACATTAGAAAAAGTTCAAAAAAATGGATATTTACAATGTGGTGTGAGTACTGGTTTACCTGGTTTTTCAAACCCTA
ACTCAAAAGGTGAATGGGAAGGTATCGACGTTGAATTCTGTCAAGCCGTCGCAGCTGCCGTACTAGGTGATAAATCTAAA
GTAAAATACGTACCTTTAACAGCCAAAGAGCGATTTACAGCTCTACAGTCAGGCGAGATTGATGTGCTTTCTCGTAACAC
TACATGGACTTTACACCGAGACACTTCTTTAGGCCTAAATTTTGTCGGTGTAAATTACTATGATGGTCAAGGCTTCATGG
TTAAGAAAGAGCTTGGATTAACGAGTGCAAAAGAACTTGATGGCGCATCGGTTTGTGTTCAATCAGGTACAACTACCGAG
TTAAACCTTGCTGACTACTTCCGTAATAATAATATGGAATACAAACCAGTGGTTTTTGATACTGCAGCACAAACATCTAA
AGGTTTTGATGCCGGCCGTTGTGATGTTCTTACCACCGACCAATCTGGTTTGTATGCTCTACGCCTTAATTTAAAAGATC
CTAAAACAGCTCAAGTTTTACCAGAAATAATCTCAAAAGAACCCTTAGGTCCGGTAGTTCGCCAAGGGGATGATCAATGG
TTCAACATTAATAAATGGGTTTTAAATACCATGATCAATGCTGAGGAATACGGTATCAGTTCTAAAAATGCTGACCAAAT
GCTGAAATCGAAAGATCCAAACATTAAACGTATTCTTGGTGTTGATGGGCCAAAAGGCAAAGGATTGGGAATTCGTGATG
ATTGGGGCTACCAAGTGGTGAAACAAGTCGGTAACTATGGCGAAAGTTTTGAACGCACCGTAGGTGAAGGTTCTCCATTA
CAAATCTCTCGTGGCGTCAATGCACTTTGGAATGCTGGTGGCTTTGTGTATGCAGCACCCATTCGTTAA

Upstream 100 bases:

>100_bases
ACAGTTGCTTAAAAATAAGGCAATCGTTCTATCAACGGCTAACTCAACGCAATAGATTGAGATAAGCCAGCTAAATTACG
CACAACAAGGAAGAACACAG

Downstream 100 bases:

>100_bases
TCAACTCATAGTCTAATTATAAATATAAAAACACAATTTATGGGGTGAATCTTCACCCCTTTTAATAAATGGATTTAAGG
TTGTAGTTGTATGTCATCTA

Product: general L-amino acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEFCQAVAAAVLGDKSK
VKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTE
LNLADYFRNNNMEYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW
FNINKWVLNTMINAEEYGISSKNADQMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVVKQVGNYGESFERTVGEGSPL
QISRGVNALWNAGGFVYAAPIR

Sequences:

>Translated_342_residues
MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEFCQAVAAAVLGDKSK
VKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTE
LNLADYFRNNNMEYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW
FNINKWVLNTMINAEEYGISSKNADQMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVVKQVGNYGESFERTVGEGSPL
QISRGVNALWNAGGFVYAAPIR
>Mature_342_residues
MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWEGIDVEFCQAVAAAVLGDKSK
VKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLNFVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTE
LNLADYFRNNNMEYKPVVFDTAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW
FNINKWVLNTMINAEEYGISSKNADQMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVVKQVGNYGESFERTVGEGSPL
QISRGVNALWNAGGFVYAAPIR

Specific function: Part of a binding-protein-dependent transport system for L-amino acids, affects the uptake as well as efflux of these amino acids [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786876, Length=250, Percent_Identity=24, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005768
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 37084; Mature: 37084

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE
CCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN
CCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEE
FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD
EEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCCCCEEEHHHHHHCCCCEECEEEEE
TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW
CCHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCCCE
FNINKWVLNTMINAEEYGISSKNADQMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVV
EEHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR
HHHHCCCHHHHHHCCCCCCEEEECCCHHHHCCCCEEEECCCC
>Mature Secondary Structure
MKFKTNKLFAAIATSAALLSAPALAASGTLEKVQKNGYLQCGVSTGLPGFSNPNSKGEWE
CCCCCHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCC
GIDVEFCQAVAAAVLGDKSKVKYVPLTAKERFTALQSGEIDVLSRNTTWTLHRDTSLGLN
CCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHCCCCEEEEECCCEEEEECCCCCCEE
FVGVNYYDGQGFMVKKELGLTSAKELDGASVCVQSGTTTELNLADYFRNNNMEYKPVVFD
EEEEEEECCCCEEEECCCCCCCHHHCCCCEEEEECCCCCEEEHHHHHHCCCCEECEEEEE
TAAQTSKGFDAGRCDVLTTDQSGLYALRLNLKDPKTAQVLPEIISKEPLGPVVRQGDDQW
CCHHCCCCCCCCCCEEEEECCCCEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHCCCCCE
FNINKWVLNTMINAEEYGISSKNADQMLKSKDPNIKRILGVDGPKGKGLGIRDDWGYQVV
EEHHHHHHHHHCCHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHH
KQVGNYGESFERTVGEGSPLQISRGVNALWNAGGFVYAAPIR
HHHHCCCHHHHHHCCCCCCEEEECCCHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8898392 [H]