| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is ansB [H]
Identifier: 59712134
GI number: 59712134
Start: 1709434
End: 1710495
Strand: Reverse
Name: ansB [H]
Synonym: VF_1527
Alternate gene names: 59712134
Gene position: 1710495-1709434 (Counterclockwise)
Preceding gene: 59712137
Following gene: 59712132
Centisome position: 59.03
GC content: 39.55
Gene sequence:
>1062_bases ATGAAAAAGAATGCCATTGCAGTAGGTATGTTGCTTTCTGGTCTTTGCTTTAGCTCAATCAGTCTTGCTGATGATTTACC AAATATTAAAATCTTAGCGACTGGCGGTACTATTGCTGGCGCAGGTCAATCCGCAACAGGTTCTAGCTATACATCTGGTA AAGTTGGAGTCGATTCTTTGATTCATGCTGTACCTCAAATGACAGAAATTGCGGATATTAGTGGTGAACAAGTCGTAAGT ATCGGTTCTCAAGATATGAATGATGAGGTATGGCTAACATTATCAAAGCGTGTAAATGAATTATTAGCTCAAGATGATGT TGATGGTGTTGTGATTACTCATGGCACAGATACGATGGAAGAAACTGCTTATTTCCTAGACCTTACTGTTAAAAGTGATA AACCTGTAATTTTGGTTGGTGCAATGCGACCATCAACAGCAATGAGTGCCGATGGTCCGGTCAATTTATATAATGCGGTT GTTGCGGCAACGGATGAAGATTCTGTAGGGCGTGGTGTATTGGTTGCAATGAATGATACGGTATTTGATGCTCGTGATGT AACCAAAACCAATACAACGTCTGTAAATACGTTTCAGTCACCAAATTTTGGGCCTCTAGGCTATATTCACAATGGTGATG TTCAATATCAACGTAGCCCTGAACGTAAGCATACAACTGAAGCTGAATTTGATGTATCAAAGTTAAAAACCTTACCTAAG GTTGGTATTGTGTACAACTATGCGAATGCATCAGCATTACCTGTAACAGCAATGGTTGATGCAAAATATGATGGTATCGT GAGTGCGGGTGTAGGTAATGGTAATATTTATCACTCGGTATTTGATGAGTTAGCTAAAGCAAGCAAAGAAGGGGTGGTGG TTGTACGTAGTGCTCGCACTGGTTCAGGTTCAACAACGCTTGATGCTGAAATAGATGATGCGAAATACGGTTTTGTTGCG TCGGGTACATTAAACCCTCAAAAAGCTCGAATTTTATTGATGTTGTCGTTAACTGAAACGGAAAACTACAAAGAAATTCA AAAGATGTTTCAGTATTACTAG
Upstream 100 bases:
>100_bases GTTATCACGGTACATTAATTAAAAGCAAATATGATGAATTAAATCAAAATATGTAATTTTATTTTCTCGTAATTAATTGT TTTTATAATGGAGTACTAAC
Downstream 100 bases:
>100_bases AAGCATATAGTTTCGTATTTTAAATAAAAAAACAGCCAATATTAATTATTGGCTGTTTTTTTATTTGGAAGGATGAAATG TTTATGTAGGTTGGTATTAA
Product: L-asparaginase II
Products: NA
Alternate protein names: L-asparaginase II; L-ASNase II; L-asparagine amidohydrolase II; Colaspase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MKKNAIAVGMLLSGLCFSSISLADDLPNIKILATGGTIAGAGQSATGSSYTSGKVGVDSLIHAVPQMTEIADISGEQVVS IGSQDMNDEVWLTLSKRVNELLAQDDVDGVVITHGTDTMEETAYFLDLTVKSDKPVILVGAMRPSTAMSADGPVNLYNAV VAATDEDSVGRGVLVAMNDTVFDARDVTKTNTTSVNTFQSPNFGPLGYIHNGDVQYQRSPERKHTTEAEFDVSKLKTLPK VGIVYNYANASALPVTAMVDAKYDGIVSAGVGNGNIYHSVFDELAKASKEGVVVVRSARTGSGSTTLDAEIDDAKYGFVA SGTLNPQKARILLMLSLTETENYKEIQKMFQYY
Sequences:
>Translated_353_residues MKKNAIAVGMLLSGLCFSSISLADDLPNIKILATGGTIAGAGQSATGSSYTSGKVGVDSLIHAVPQMTEIADISGEQVVS IGSQDMNDEVWLTLSKRVNELLAQDDVDGVVITHGTDTMEETAYFLDLTVKSDKPVILVGAMRPSTAMSADGPVNLYNAV VAATDEDSVGRGVLVAMNDTVFDARDVTKTNTTSVNTFQSPNFGPLGYIHNGDVQYQRSPERKHTTEAEFDVSKLKTLPK VGIVYNYANASALPVTAMVDAKYDGIVSAGVGNGNIYHSVFDELAKASKEGVVVVRSARTGSGSTTLDAEIDDAKYGFVA SGTLNPQKARILLMLSLTETENYKEIQKMFQYY >Mature_353_residues MKKNAIAVGMLLSGLCFSSISLADDLPNIKILATGGTIAGAGQSATGSSYTSGKVGVDSLIHAVPQMTEIADISGEQVVS IGSQDMNDEVWLTLSKRVNELLAQDDVDGVVITHGTDTMEETAYFLDLTVKSDKPVILVGAMRPSTAMSADGPVNLYNAV VAATDEDSVGRGVLVAMNDTVFDARDVTKTNTTSVNTFQSPNFGPLGYIHNGDVQYQRSPERKHTTEAEFDVSKLKTLPK VGIVYNYANASALPVTAMVDAKYDGIVSAGVGNGNIYHSVFDELAKASKEGVVVVRSARTGSGSTTLDAEIDDAKYGFVA SGTLNPQKARILLMLSLTETENYKEIQKMFQYY
Specific function: Unknown
COG id: COG0252
COG function: function code EJ; L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the asparaginase 1 family [H]
Homologues:
Organism=Homo sapiens, GI122937331, Length=230, Percent_Identity=30, Blast_Score=79, Evalue=9e-15, Organism=Escherichia coli, GI1789327, Length=353, Percent_Identity=69.6883852691218, Blast_Score=472, Evalue=1e-134, Organism=Escherichia coli, GI1788065, Length=292, Percent_Identity=30.1369863013699, Blast_Score=94, Evalue=1e-20, Organism=Caenorhabditis elegans, GI193207372, Length=229, Percent_Identity=26.2008733624454, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17558280, Length=228, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17558278, Length=228, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=8e-11, Organism=Caenorhabditis elegans, GI193207374, Length=228, Percent_Identity=26.3157894736842, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6323189, Length=333, Percent_Identity=42.9429429429429, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6323187, Length=333, Percent_Identity=42.9429429429429, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6323186, Length=333, Percent_Identity=42.9429429429429, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6323184, Length=333, Percent_Identity=42.9429429429429, Blast_Score=229, Evalue=7e-61, Organism=Saccharomyces cerevisiae, GI6320527, Length=336, Percent_Identity=38.0952380952381, Blast_Score=201, Evalue=2e-52, Organism=Drosophila melanogaster, GI24645530, Length=208, Percent_Identity=31.25, Blast_Score=71, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004550 - InterPro: IPR006034 - InterPro: IPR020827 [H]
Pfam domain/function: PF00710 Asparaginase [H]
EC number: =3.5.1.1 [H]
Molecular weight: Translated: 37561; Mature: 37561
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00445 FGGY_KINASES_2 ; PS00144 ASN_GLN_ASE_1 ; PS00917 ASN_GLN_ASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKNAIAVGMLLSGLCFSSISLADDLPNIKILATGGTIAGAGQSATGSSYTSGKVGVDSL CCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHH IHAVPQMTEIADISGEQVVSIGSQDMNDEVWLTLSKRVNELLAQDDVDGVVITHGTDTME HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCHH ETAYFLDLTVKSDKPVILVGAMRPSTAMSADGPVNLYNAVVAATDEDSVGRGVLVAMNDT HCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCC VFDARDVTKTNTTSVNTFQSPNFGPLGYIHNGDVQYQRSPERKHTTEAEFDVSKLKTLPK EECCCCCCCCCCCEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHCCCC VGIVYNYANASALPVTAMVDAKYDGIVSAGVGNGNIYHSVFDELAKASKEGVVVVRSART EEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCC GSGSTTLDAEIDDAKYGFVASGTLNPQKARILLMLSLTETENYKEIQKMFQYY CCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MKKNAIAVGMLLSGLCFSSISLADDLPNIKILATGGTIAGAGQSATGSSYTSGKVGVDSL CCCCCEEHHHHHHHHHHHHHHHHCCCCCEEEEEECCEEECCCCCCCCCCCCCCCCCHHHH IHAVPQMTEIADISGEQVVSIGSQDMNDEVWLTLSKRVNELLAQDDVDGVVITHGTDTME HHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCCCCHH ETAYFLDLTVKSDKPVILVGAMRPSTAMSADGPVNLYNAVVAATDEDSVGRGVLVAMNDT HCEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCC VFDARDVTKTNTTSVNTFQSPNFGPLGYIHNGDVQYQRSPERKHTTEAEFDVSKLKTLPK EECCCCCCCCCCCEEEECCCCCCCCCCEEECCCEEECCCCCCCCCCCCCCCHHHHHCCCC VGIVYNYANASALPVTAMVDAKYDGIVSAGVGNGNIYHSVFDELAKASKEGVVVVRSART EEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCEEEEEECCC GSGSTTLDAEIDDAKYGFVASGTLNPQKARILLMLSLTETENYKEIQKMFQYY CCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2407723; 2144836; 9278503; 6766894; 387570; 321449; 4561256; 1906013; 1521538; 1287659; 8434007; 8706862 [H]