Definition Vibrio fischeri ES114 chromosome I, complete genome.
Accession NC_006840
Length 2,897,536

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The map label for this gene is 59712100

Identifier: 59712100

GI number: 59712100

Start: 1652557

End: 1652940

Strand: Direct

Name: 59712100

Synonym: VF_1493

Alternate gene names: NA

Gene position: 1652557-1652940 (Clockwise)

Preceding gene: 59712098

Following gene: 59712105

Centisome position: 57.03

GC content: 34.11

Gene sequence:

>384_bases
ATGAACACAGCAATGGCTCTTACTACTTACTCAAACTCATTTAATTATTCTATCTCTCAACGCATTTCTAGCGCTGCTAG
CCAAGTAAATGCACAGTGTGAGAGCCAGTTTATTCAAATTTTAAAAAGCTTGTCTAAACAAAATAAATGGATTTTCATTA
CTGCAAATACAGCAATGCCAAGTAGTGAATCGCTTCTAAAGCATGGTATTGAACTAAGTAAATTCGTACGTTTAAAAGAA
TCTCATCGTTTAACGGAAAGTGAAACGATCGAAAAAGCAAAACAATTAGGCACAGCCAGTGCCATTATTTCTAATGCTAA
TTGTTTTTATTTTTCCGATTCACAATGGCTAACCCTGAACAGAAAATTAACCGTATTGCATTAA

Upstream 100 bases:

>100_bases
GCGTTTAAGATCTCAATAAACAAGCAAAAATAGCTTGATCATTAACCGATTTAAAAGTACTGTATAAATACACACTGTAT
GGATGAACAGGTATTTTATT

Downstream 100 bases:

>100_bases
ATATAGGTGAGCATAGCTGTAAATTAACAACTACTGTGTTTTCTCATTTAGGTGGACATGGAGTAAATCAAAATCATCAG
TTGATTGAGAAATGTCTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MNTAMALTTYSNSFNYSISQRISSAASQVNAQCESQFIQILKSLSKQNKWIFITANTAMPSSESLLKHGIELSKFVRLKE
SHRLTESETIEKAKQLGTASAIISNANCFYFSDSQWLTLNRKLTVLH

Sequences:

>Translated_127_residues
MNTAMALTTYSNSFNYSISQRISSAASQVNAQCESQFIQILKSLSKQNKWIFITANTAMPSSESLLKHGIELSKFVRLKE
SHRLTESETIEKAKQLGTASAIISNANCFYFSDSQWLTLNRKLTVLH
>Mature_127_residues
MNTAMALTTYSNSFNYSISQRISSAASQVNAQCESQFIQILKSLSKQNKWIFITANTAMPSSESLLKHGIELSKFVRLKE
SHRLTESETIEKAKQLGTASAIISNANCFYFSDSQWLTLNRKLTVLH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14269; Mature: 14269

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAMALTTYSNSFNYSISQRISSAASQVNAQCESQFIQILKSLSKQNKWIFITANTAMP
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
SSESLLKHGIELSKFVRLKESHRLTESETIEKAKQLGTASAIISNANCFYFSDSQWLTLN
CHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCCEEEEC
RKLTVLH
CEEEEEC
>Mature Secondary Structure
MNTAMALTTYSNSFNYSISQRISSAASQVNAQCESQFIQILKSLSKQNKWIFITANTAMP
CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
SSESLLKHGIELSKFVRLKESHRLTESETIEKAKQLGTASAIISNANCFYFSDSQWLTLN
CHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHCCCCEEEEECCCEEEEC
RKLTVLH
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA