| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712047
Identifier: 59712047
GI number: 59712047
Start: 1592494
End: 1592913
Strand: Reverse
Name: 59712047
Synonym: VF_1440
Alternate gene names: NA
Gene position: 1592913-1592494 (Counterclockwise)
Preceding gene: 59712048
Following gene: 59712046
Centisome position: 54.97
GC content: 36.19
Gene sequence:
>420_bases ATGAAAAAAGGATTATTGGGTATTATTGCGGTTGGTTTATTTGTTTTTATTACAAGTAATATGAATAATACGGAAAGAGT ACCATTAAATACGCCATTACCTGATAATCCTTCATTTAATATATCAAACGATTTTGATGGTGATTGGAGTGGTAAACGTA TTGATATTAGTGGTGATAGTATTTGTCGCCAAACAAGTGTTGTCGGTGCCATTCAAGAAGGGAAAGTGTCGTTAAGACTG GTGTATAACAATACGACCTTAAAAGGATGGATATCTGATCACGGGGAGCTAGCCTTGTATGCTGATAGTCAAAAGTGGGG TTATCGCTTCACTGGTTTAGCTAAAAATAATCGTATTGAAGGTGAATGGAAAGTAACAAACGCACCGTGCCGAGGTACAT GGTTTATTGAAAAACAATAG
Upstream 100 bases:
>100_bases TCGATATAAATACCATTGTTGTTGAACCTGTAAAAGCCACACTACGTGATAATAAAGCAACAGAGTAGTTTGTTATTTGA ATGTATTATAAGGATATAAA
Downstream 100 bases:
>100_bases AAGAAATGATTCATATCGCTGTCGTGAAAGATCAATTGCTTTTAATGGTTACCGAATTTATTACGTAATTAATTCACTTA ATCGCATCGAAATAGGCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKKGLLGIIAVGLFVFITSNMNNTERVPLNTPLPDNPSFNISNDFDGDWSGKRIDISGDSICRQTSVVGAIQEGKVSLRL VYNNTTLKGWISDHGELALYADSQKWGYRFTGLAKNNRIEGEWKVTNAPCRGTWFIEKQ
Sequences:
>Translated_139_residues MKKGLLGIIAVGLFVFITSNMNNTERVPLNTPLPDNPSFNISNDFDGDWSGKRIDISGDSICRQTSVVGAIQEGKVSLRL VYNNTTLKGWISDHGELALYADSQKWGYRFTGLAKNNRIEGEWKVTNAPCRGTWFIEKQ >Mature_139_residues MKKGLLGIIAVGLFVFITSNMNNTERVPLNTPLPDNPSFNISNDFDGDWSGKRIDISGDSICRQTSVVGAIQEGKVSLRL VYNNTTLKGWISDHGELALYADSQKWGYRFTGLAKNNRIEGEWKVTNAPCRGTWFIEKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15526; Mature: 15526
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKGLLGIIAVGLFVFITSNMNNTERVPLNTPLPDNPSFNISNDFDGDWSGKRIDISGDS CCCCHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCEEEECCCC ICRQTSVVGAIQEGKVSLRLVYNNTTLKGWISDHGELALYADSQKWGYRFTGLAKNNRIE HHHHHHHEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC GEWKVTNAPCRGTWFIEKQ CEEEEECCCCCEEEEEECC >Mature Secondary Structure MKKGLLGIIAVGLFVFITSNMNNTERVPLNTPLPDNPSFNISNDFDGDWSGKRIDISGDS CCCCHHHHHHHHHHEEEECCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCEEEECCCC ICRQTSVVGAIQEGKVSLRLVYNNTTLKGWISDHGELALYADSQKWGYRFTGLAKNNRIE HHHHHHHEEEEECCCEEEEEEECCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCC GEWKVTNAPCRGTWFIEKQ CEEEEECCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA