| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59712041
Identifier: 59712041
GI number: 59712041
Start: 1588158
End: 1588355
Strand: Direct
Name: 59712041
Synonym: VF_1434
Alternate gene names: NA
Gene position: 1588158-1588355 (Clockwise)
Preceding gene: 59712040
Following gene: 59712044
Centisome position: 54.81
GC content: 34.34
Gene sequence:
>198_bases ATGAATACCGTTTTAATTACTTTTGGCGCTTTTGTATTGGTCATTTTACTAATGGCATTAGGTGTGATTTTTGGACGTAA AGAGATCCAAGGAAGTTGCGGAGGATTAAATAATGTTGGTGTTGATAAAGTATGTAATTGCGAAACAACTTGTGATGAAC ACAAGCTTTATCAAATTTCAGAGCCAACGGACAAATAA
Upstream 100 bases:
>100_bases CAAAACAAGGTTGTTGTAGCAAAAAACAAAATGTTATGACGCCGAAGTTAACAGCACCCTCACGACTAAAACAAACATTC ACTGTATTAGGATGTAAAGC
Downstream 100 bases:
>100_bases AAAGTGAAACCAGTTATCTAGTTTCACTTTGCAATTTTGGTAACGTTTTATTTCGTTTCTTTTGTATTATATCAATCACA GTAAGTAAGTGATCAGAAAT
Product: putative periplasmic protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MNTVLITFGAFVLVILLMALGVIFGRKEIQGSCGGLNNVGVDKVCNCETTCDEHKLYQISEPTDK
Sequences:
>Translated_65_residues MNTVLITFGAFVLVILLMALGVIFGRKEIQGSCGGLNNVGVDKVCNCETTCDEHKLYQISEPTDK >Mature_65_residues MNTVLITFGAFVLVILLMALGVIFGRKEIQGSCGGLNNVGVDKVCNCETTCDEHKLYQISEPTDK
Specific function: Unknown
COG id: COG2991
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7048; Mature: 7048
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTVLITFGAFVLVILLMALGVIFGRKEIQGSCGGLNNVGVDKVCNCETTCDEHKLYQIS CCEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC EPTDK CCCCC >Mature Secondary Structure MNTVLITFGAFVLVILLMALGVIFGRKEIQGSCGGLNNVGVDKVCNCETTCDEHKLYQIS CCEEEEHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC EPTDK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA