| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
Click here to switch to the map view.
The map label for this gene is 59712031
Identifier: 59712031
GI number: 59712031
Start: 1575961
End: 1576899
Strand: Reverse
Name: 59712031
Synonym: VF_1424
Alternate gene names: NA
Gene position: 1576899-1575961 (Counterclockwise)
Preceding gene: 59712032
Following gene: 59712030
Centisome position: 54.42
GC content: 38.45
Gene sequence:
>939_bases ATGACAGAGAAAAGCACAGACGCACGCATATACTGTGAATATAGCAAACTGGTAAAATTACAGTCTCAAGCTGGTTTTTT TAGTTTGCTTCCTAACCTAAAATCAGGGACGGCATTGTCTGGTCGTCACTCTTCAGTATTTCGTGGACGCGGATTAAATT TTGAAGAGTTAAGGCACTACCAATTAGGGGATGATATTCGAAATCTTGATTGGAAAGTGACCATGCGAACAGGCAAACCT CATGTTCGTTCTTATACCGAAGAGAAAGATCGAAATTTTATTATCTGTGTTGATCAACGCAGTAGTATGTTTTTTTCATC GGTCGATACGATGAAATCGGTTGTTGCGGCGGAATTAGCCGCTTTAACGGCATGGCGCATTTTGCAAGACAGTGATCGTG TTGGTTTTGTCATTAATGCAACTGAGAAATTACATTGGTTGACACCAAAACGTTCTCAAGGTGATTTGCTCCATCGATTG CAATTGTTAGCAAGTTCAAATCAATCTTTAAACGTGACAAGCACCGATGTTGATTCCGTTAGTTTTACACAATTTGTCAC CCTGCTTGGTCGTTTAAAACTCAAAGAAGCTACGATTATTATTTTGAGTGATTGGAGTGGTGCAACCCCTGATGATGTTA CTCATTTAAAACACCTTCAAAAACATAATGATGTGCTTGGTGTTCTTATCTCTGATCCTTTCGAATCAATGTTTCCTTCA TTAAATAATGAATGGGTTGTTGGTGATGGGGATTTTCAAATTAATCTAAATGATGCCAAAAAATTTGATTTAGCGAACAA AGGACTTACTGAGCATCAGTCATTGAAAAAAGAACAACTTATTCAATTAATGGCAGCAAAAGGACTTCCTACTATAGAAG TGGATACGTCAGGATCTCATATTGAGCAGTTCAAGCGTGCAATAGGAGGACGTCGATGA
Upstream 100 bases:
>100_bases ATCGTGTTACGTTAAGTTATGACGCTTTAGCGGATGGAGTGACACAAGAGCAAGTGATAAATGAATTATTGGATCACGTT GTTATTGGGTAGGGCTTTTG
Downstream 100 bases:
>100_bases GCATACATCAGCCACCTAGCAGTTATATATTAAAAAAATTAAGTGAAGTGACGGTTCCTGAACACGTCAGTTGGTTTCCT CAGACCATTGGATGGAAAAT
Product: MoxR protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MTEKSTDARIYCEYSKLVKLQSQAGFFSLLPNLKSGTALSGRHSSVFRGRGLNFEELRHYQLGDDIRNLDWKVTMRTGKP HVRSYTEEKDRNFIICVDQRSSMFFSSVDTMKSVVAAELAALTAWRILQDSDRVGFVINATEKLHWLTPKRSQGDLLHRL QLLASSNQSLNVTSTDVDSVSFTQFVTLLGRLKLKEATIIILSDWSGATPDDVTHLKHLQKHNDVLGVLISDPFESMFPS LNNEWVVGDGDFQINLNDAKKFDLANKGLTEHQSLKKEQLIQLMAAKGLPTIEVDTSGSHIEQFKRAIGGRR
Sequences:
>Translated_312_residues MTEKSTDARIYCEYSKLVKLQSQAGFFSLLPNLKSGTALSGRHSSVFRGRGLNFEELRHYQLGDDIRNLDWKVTMRTGKP HVRSYTEEKDRNFIICVDQRSSMFFSSVDTMKSVVAAELAALTAWRILQDSDRVGFVINATEKLHWLTPKRSQGDLLHRL QLLASSNQSLNVTSTDVDSVSFTQFVTLLGRLKLKEATIIILSDWSGATPDDVTHLKHLQKHNDVLGVLISDPFESMFPS LNNEWVVGDGDFQINLNDAKKFDLANKGLTEHQSLKKEQLIQLMAAKGLPTIEVDTSGSHIEQFKRAIGGRR >Mature_311_residues TEKSTDARIYCEYSKLVKLQSQAGFFSLLPNLKSGTALSGRHSSVFRGRGLNFEELRHYQLGDDIRNLDWKVTMRTGKPH VRSYTEEKDRNFIICVDQRSSMFFSSVDTMKSVVAAELAALTAWRILQDSDRVGFVINATEKLHWLTPKRSQGDLLHRLQ LLASSNQSLNVTSTDVDSVSFTQFVTLLGRLKLKEATIIILSDWSGATPDDVTHLKHLQKHNDVLGVLISDPFESMFPSL NNEWVVGDGDFQINLNDAKKFDLANKGLTEHQSLKKEQLIQLMAAKGLPTIEVDTSGSHIEQFKRAIGGRR
Specific function: Unknown
COG id: COG1721
COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35138; Mature: 35007
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKSTDARIYCEYSKLVKLQSQAGFFSLLPNLKSGTALSGRHSSVFRGRGLNFEELRHY CCCCCCCCEEEEEHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCHHHCCCCCCHHHHHHH QLGDDIRNLDWKVTMRTGKPHVRSYTEEKDRNFIICVDQRSSMFFSSVDTMKSVVAAELA HCCCCHHCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH ALTAWRILQDSDRVGFVINATEKLHWLTPKRSQGDLLHRLQLLASSNQSLNVTSTDVDSV HHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCH SFTQFVTLLGRLKLKEATIIILSDWSGATPDDVTHLKHLQKHNDVLGVLISDPFESMFPS HHHHHHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCC LNNEWVVGDGDFQINLNDAKKFDLANKGLTEHQSLKKEQLIQLMAAKGLPTIEVDTSGSH CCCCEEEECCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH IEQFKRAIGGRR HHHHHHHHCCCC >Mature Secondary Structure TEKSTDARIYCEYSKLVKLQSQAGFFSLLPNLKSGTALSGRHSSVFRGRGLNFEELRHY CCCCCCCEEEEEHHHHHHHHHCCCHHHHCCCCCCCCEECCCCCHHHCCCCCCHHHHHHH QLGDDIRNLDWKVTMRTGKPHVRSYTEEKDRNFIICVDQRSSMFFSSVDTMKSVVAAELA HCCCCHHCCEEEEEEECCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH ALTAWRILQDSDRVGFVINATEKLHWLTPKRSQGDLLHRLQLLASSNQSLNVTSTDVDSV HHHHHHHHCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCH SFTQFVTLLGRLKLKEATIIILSDWSGATPDDVTHLKHLQKHNDVLGVLISDPFESMFPS HHHHHHHHHHHHEEEEEEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHCCC LNNEWVVGDGDFQINLNDAKKFDLANKGLTEHQSLKKEQLIQLMAAKGLPTIEVDTSGSH CCCCEEEECCEEEEEECCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHH IEQFKRAIGGRR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA