| Definition | Vibrio fischeri ES114 chromosome I, complete genome. |
|---|---|
| Accession | NC_006840 |
| Length | 2,897,536 |
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The map label for this gene is 59711971
Identifier: 59711971
GI number: 59711971
Start: 1509173
End: 1509691
Strand: Reverse
Name: 59711971
Synonym: VF_1364
Alternate gene names: NA
Gene position: 1509691-1509173 (Counterclockwise)
Preceding gene: 59711972
Following gene: 59711970
Centisome position: 52.1
GC content: 40.08
Gene sequence:
>519_bases GTGAGCAACTTCCTAAGTAGATGGTCTTTAAGAAAACAAAAGGTTAAGCAGGGTGAAGAAGTCAGTGATGAGCCAGTATT AAATACTGAATCAGACACGGTAGAAGATTCACAAGCCCTTGTTGAGCCTAGTGTTGCTGTTGAAAAAGAAAGCGAAACTG AGATAGAGCCTGAACTGCCTACCGAAGCAGATTTAGTCACTATCACAGGCACAAGTAACGTCAGTCAATTTATGGCTGAA GGCGTAGACAAAAACTTGAAAAAAGCAGCACTTCGTAAGATGTTTTTGAATCCAGAGTTTGCGATGGAAGATGAGCCAAA CTACTCAACACCACCAAAACTGGACAGTGAAACAGCAAGCAAGTTACGTGAATGGTTAGTCGAGCCTGAAGAAGAACAAG ACGAGATTTCAGACGAAGAAATTGCTCTTGATACTGACGCTATAAATGAAAATGATAATGAATATCAATACGTTAATGGC GACGATATTGACCCAAGTGAGACAAAAAAGACCATATAA
Upstream 100 bases:
>100_bases ATGCCGCTACCGATGCAAGCATGGTTAGAAGCTTATATTGGTAAACACGGTGAGTTATTAGAAGTTCGTAAGAAAAAACG TAAAGGTGCGGGGCGCGCAA
Downstream 100 bases:
>100_bases AGAATCGGGACATTTTGAACCAAGTTGAGACAAAATGTCCCGTATAAAAATAACTCCCGCCAAATAGTCTAAATAATCAA CAAATCGACCTATTAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSNFLSRWSLRKQKVKQGEEVSDEPVLNTESDTVEDSQALVEPSVAVEKESETEIEPELPTEADLVTITGTSNVSQFMAE GVDKNLKKAALRKMFLNPEFAMEDEPNYSTPPKLDSETASKLREWLVEPEEEQDEISDEEIALDTDAINENDNEYQYVNG DDIDPSETKKTI
Sequences:
>Translated_172_residues MSNFLSRWSLRKQKVKQGEEVSDEPVLNTESDTVEDSQALVEPSVAVEKESETEIEPELPTEADLVTITGTSNVSQFMAE GVDKNLKKAALRKMFLNPEFAMEDEPNYSTPPKLDSETASKLREWLVEPEEEQDEISDEEIALDTDAINENDNEYQYVNG DDIDPSETKKTI >Mature_171_residues SNFLSRWSLRKQKVKQGEEVSDEPVLNTESDTVEDSQALVEPSVAVEKESETEIEPELPTEADLVTITGTSNVSQFMAEG VDKNLKKAALRKMFLNPEFAMEDEPNYSTPPKLDSETASKLREWLVEPEEEQDEISDEEIALDTDAINENDNEYQYVNGD DIDPSETKKTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19419; Mature: 19288
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNFLSRWSLRKQKVKQGEEVSDEPVLNTESDTVEDSQALVEPSVAVEKESETEIEPELP CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCC TEADLVTITGTSNVSQFMAEGVDKNLKKAALRKMFLNPEFAMEDEPNYSTPPKLDSETAS CCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH KLREWLVEPEEEQDEISDEEIALDTDAINENDNEYQYVNGDDIDPSETKKTI HHHHHCCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCHHHHCCCC >Mature Secondary Structure SNFLSRWSLRKQKVKQGEEVSDEPVLNTESDTVEDSQALVEPSVAVEKESETEIEPELP CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHCCCCCCCCCCCCCC TEADLVTITGTSNVSQFMAEGVDKNLKKAALRKMFLNPEFAMEDEPNYSTPPKLDSETAS CCCCEEEEECCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH KLREWLVEPEEEQDEISDEEIALDTDAINENDNEYQYVNGDDIDPSETKKTI HHHHHCCCCCCHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA